Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 9dzq
Q-score: 0.335
Miller RJ, Durie IA, Gingerich AD, Elbehairy MA, Branch AG, Davis RG, Abbadi N, Brindley MA, Mousa JJ
Nat Commun (2024) 15 pp. 10825-10825 [ DOI: doi:10.1038/s41467-024-55101-4 Pubmed: 39738006 ]
- Human antibody piv3hn-05 light chain (22 kDa, Protein from Homo sapiens)
- Hemagglutinin-neuraminidase (51 kDa, Protein from Human respirovirus 3)
- Human antibody piv3hn-13 heavy chain (23 kDa, Protein from Homo sapiens)
- Human antibody piv3hn-13 light chain (23 kDa, Protein from Homo sapiens)
- Human antibody piv3hn-05 heavy chain (24 kDa, Protein from Homo sapiens)
- Complex of the piv3 hn protein with two human antibodies (200 kDa, Complex from Human respirovirus 3)
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 8ghk
Q-score: 0.507
Nagashima KA, Dzimianski JV, Yang M, Abendroth J, Sautto GA, Ross TM, DuBois RM, Edwards TE, Mousa JJ
Structure (2024) 32 pp. 1079- [ Pubmed: 38810648 DOI: doi:10.1016/j.str.2024.05.001 ]
- Gs10-x6-be4 fab heavy chain (16 kDa, Protein from Homo sapiens)
- Hemagglutinin (53 kDa, Protein from Influenza A virus)
- Cryoem structure of influenza a virus a/melbourner/1/1946 (h1n1) hemagglutinin bound to gs10-x6-be4 fab (221 kDa, Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Gs10-x6-be4 fab light chain (13 kDa, Protein from Homo sapiens)
Resolution: 3.57 Å
EM Method: Single-particle
Fitted PDBs: 8v7o
Q-score: 0.453
Nagashima KA, Dzimianski JV, Yang M, Abendroth J, Sautto GA, Ross TM, DuBois RM, Edwards TE, Mousa JJ
Structure (2024) 32 pp. 1079- [ Pubmed: 38810648 DOI: doi:10.1016/j.str.2024.05.001 ]
- Complex of cobra ha x6 with #58 fab (Complex from Homo sapiens)
- #58 heavy chain (14 kDa, Protein from Homo sapiens)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- #58 light chain (11 kDa, Protein from Homo sapiens)
Cryo-EM structure of X6 COBRA (H1N1) hemagglutinin bound to CR6261 Fab
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8f38
Q-score: 0.615
Nagashima KA, Dzimianski JV, Yang M, Abendroth J, Sautto GA, Ross TM, DuBois RM, Edwards TE, Mousa JJ
Structure (2024) 32 pp. 1079- [ Pubmed: 38810648 DOI: doi:10.1016/j.str.2024.05.001 ]
- Cryo-em structure of x6 cobra (h1n1) hemagglutinin bound to cr6261 fab (450 kDa, Complex)
- Water (18 Da, Ligand)
- Hemagglutinin (63 kDa, Protein from synthetic construct)
- Cr6261 fab light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Cr6261 fab heavy chain (24 kDa, Protein from Homo sapiens)
1F8 mAb in complex with the computationally optimized broadly reactive H1 influenza hemagglutinin P1
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8ct6
Q-score: 0.485
Dzimianski JV, Han J, Sautto GA, O'Rourke SM, Cruz JM, Pierce SR, Ecker JW, Carlock MA, Nagashima KA, Mousa JJ, Ross TM, Ward AB, DuBois RM
Commun Biol (2023) 6 pp. 454-454 [ Pubmed: 37185989 DOI: doi:10.1038/s42003-023-04793-3 ]
- Cobra p1 ha in complex with 1f8 mab (Complex from Homo sapiens)
- 1f8 monoclonal antibody (Complex from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Cobra p1 hemagglutinin (Complex from Influenza A virus)
- Cobra p1 ha (63 kDa, Protein from Influenza A virus)
- 1f8 heavy chain (23 kDa, Protein from Mus musculus)
- 1f8 light chain (23 kDa, Protein from Mus musculus)
Prefusion-stabilized SARS-CoV-2 spike protein
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8fez
Q-score: 0.312
Gonzalez KJ, Huang J, Criado MF, Banerjee A, Tompkins SM, Mousa JJ, Strauch EM
Nat Commun (2024) 15 pp. 1335-1335 [ Pubmed: 38351001 DOI: doi:10.1038/s41467-024-45480-z ]
Cryo-EM structure of antibody TJ5-5 bound to H3 COBRA TJ5 hemagglutinin
Resolution: 3.41 Å
EM Method: Single-particle
Fitted PDBs: 7tz5
Q-score: 0.477
Abbadi N, Nagashima K, Pena-Briseno A, Ross TM, Mousa JJ
J Virol (2022) 96 pp. e0089622-e0089622 [ DOI: doi:10.1128/jvi.00896-22 Pubmed: 35916534 ]
- H3 cobra ha protein in complex with human antibody tj5-5 (Complex from Homo sapiens)
- Tj5-5 heavy chain (13 kDa, Protein from Homo sapiens)
- H3 cobra hemagglutinin protein (Complex from unidentified influenza virus)
- Tj5-5 light chain (11 kDa, Protein from Homo sapiens)
- Human antibody tj5-5 (Complex from Homo sapiens)
- Hemagglutinin (55 kDa, Protein from Influenza A virus)
Resolution: 3.34 Å
EM Method: Single-particle
Fitted PDBs: 7ur4
Q-score: 0.487
Banerjee A, Huang J, Rush SA, Murray J, Gingerich AD, Royer F, Hsieh CL, Tripp RA, McLellan JS, Mousa JJ
PNAS (2022) 119 pp. e2203326119-e2203326119 [ Pubmed: 35696580 DOI: doi:10.1073/pnas.2203326119 ]
- Mpv467 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Fusion glycoprotein f0 (60 kDa, Protein from Human metapneumovirus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Trimeric prefusion hmpv f glycoprotein bound by three molecules of mpv467 fab (Complex from Human metapneumovirus)
- Mpv467 fab light chain (22 kDa, Protein from Homo sapiens)
Negative stain EM map of Y2 COBRA hemagglutinin in complex with monoclonal antibody P1-05
Nagashima K, Dzimianski JV, Han J, Abbadi N, Gingerich AD, Royer F, O'Rourke S, Sautto GA, Ross TM, Ward AB, DuBois RM, Mousa JJ
J Immunol. (2022) 209 pp. 5-15 [ DOI: doi:10.4049/jimmunol.2101171 Pubmed: 35697384 ]