elongated Cascade complex from type I-A CRISPR-Cas system
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7r21
Q-score: 0.472
Ni D, Hu C, Nam KH, Terns M, Stahlberg H, Ke A
To Be Published
- Cas11a, cas7a and type i-a crispr-associated protein cas5 (Complex from Pyrococcus furiosus DSM 3638)
- Elongated cascade complex from pyrococcus furiosus type i-a crispr/cas system (550 kDa, Complex)
- Cas11a (12 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crrna (62-mer) (Complex from Escherichia coli)
- Cas7a (36 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crrna (62-mer) (19 kDa, RNA from Escherichia coli)
- Type i-a crispr-associated protein cas5 (29 kDa, Protein from Pyrococcus furiosus DSM 3638)
elongated Cascade complex from type I-A CRISPR-Cas system
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7r2k
Q-score: 0.324
Ni D, Hu C, Nam KH, Terns M, Stahlberg H, Ke A
To Be Published
- Nickel (ii) ion (58 Da, Ligand)
- Crrna (57-mer) (18 kDa, RNA from Escherichia coli)
- Dna (5'-d(p*tp*cp*cp*c)-3') (1 kDa, DNA from Escherichia coli)
- Elongated cascade complex from pyrococcus furiosus type i-a crispr/cas system (550 kDa, Complex)
- Cas8 (38 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas11a (12 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crispr-associated endonuclease cas3-hd (27 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna (5'-d(p*tp*ap*cp*ap*ap*gp*gp*gp*a)-3') (2 kDa, DNA from Escherichia coli)
- Cas7a (36 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crispr-associated helicase cas3 (74 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Type i-a crispr-associated protein cas5 (29 kDa, Protein from Pyrococcus furiosus DSM 3638)
Cascade complex from type I-A CRISPR-Cas system
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7tr6
Q-score: 0.263
Hu C, Ni D, Nam KH, Majumdar S, McLean J, Stahlberg H, Terns MP, Ke A
Mol Cell (2022) 82 pp. 2754-2768.e5 [ Pubmed: 35835111 DOI: doi:10.1016/j.molcel.2022.06.007 ]
- Cas5a (29 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas11a (12 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crrna (45-mer) (14 kDa, RNA from Escherichia coli)
- Cas8a (38 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas7a (36 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cascade complex from pyrococcus furiosus type i-a crispr/cas system (350 kDa, Complex from Geobacter sulfurreducens)
Cascade complex from type I-A CRISPR-Cas system
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7tr8
Q-score: 0.122
Hu C, Ni D, Nam KH, Majumdar S, McLean J, Stahlberg H, Terns MP, Ke A
Mol Cell (2022) 82 pp. 2754-2768.e5 [ Pubmed: 35835111 DOI: doi:10.1016/j.molcel.2022.06.007 ]
- Nickel (ii) ion (58 Da, Ligand)
- Cas5a (29 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas3 bound cascade complex from pyrococcus furiosus type i-a crispr/cas system (400 kDa, Complex from Geobacter sulfurreducens)
- Cas8 (38 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas11a (12 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crispr-associated helicase cas3 (61 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crrna (45-mer) (14 kDa, RNA from Escherichia coli)
- Crispr-associated endonuclease cas3-hd (26 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas7a (36 kDa, Protein from Pyrococcus furiosus DSM 3638)
Cascade complex from type I-A CRISPR-Cas system
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7tr9
Q-score: 0.225
Hu C, Ni D, Nam KH, Majumdar S, McLean J, Stahlberg H, Terns MP, Ke A
Mol Cell (2022) 82 pp. 2754-2768.e5 [ Pubmed: 35835111 DOI: doi:10.1016/j.molcel.2022.06.007 ]
- Nickel (ii) ion (58 Da, Ligand)
- Cas5a (29 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Target strand dna (6 kDa, DNA from Escherichia coli)
- Non-target strand dna (2 kDa, DNA from Escherichia coli)
- Cas11a (12 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crispr-associated helicase cas3 (61 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crrna (45-mer) (14 kDa, RNA from Escherichia coli)
- Crispr-associated endonuclease cas3-hd (26 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas8a (38 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas7a (36 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Partial r-loop state of cas3-cascade complex from pyrococcus furiosus type i-a crispr/cas system (450 kDa, Complex from Geobacter sulfurreducens)
Cascade complex from type I-A CRISPR-Cas system
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7tra
Q-score: 0.324
Hu C, Ni D, Nam KH, Majumdar S, McLean J, Stahlberg H, Terns MP, Ke A
Mol Cell (2022) 82 pp. 2754-2768.e5 [ Pubmed: 35835111 DOI: doi:10.1016/j.molcel.2022.06.007 ]
- Full r-loop state of cas3-cascade complex from pyrococcus furiosus type i-a crispr/cas system (450 kDa, Complex from Geobacter sulfurreducens)
- Nickel (ii) ion (58 Da, Ligand)
- Cas5a (29 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas11a (12 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crispr-associated helicase cas3 (61 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crrna (44-mer) (14 kDa, RNA from Escherichia coli)
- Cas8a (38 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Crispr-associated endonuclease cas3-hd (24 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Cas7a (36 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Non-target strand dna (25-mer) (7 kDa, DNA from Escherichia coli)
- Target strand dna (44-mer) (13 kDa, DNA from Escherichia coli)
Cas3-Cas8 complex from type I-A CRISPR-Cas system
Hu C, Ni D, Nam KH, Majumdar S, McLean J, Stahlberg H, Terns MP, Ke A
Mol Cell (2022) 82 pp. 2754-2768.e5 [ Pubmed: 35835111 DOI: doi:10.1016/j.molcel.2022.06.007 ]