CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor
Resolution: 4.74 Å
EM Method: Single-particle
Fitted PDBs: 8dan
Q-score: 0.248
Zimmerman O, Zimmerman MI, Nelson CA, Raju S, Errico JM, Madden EA, Hassan AO, VanBlargan LA, Kim AS, Adams LJ, Basore K, Whitener BM, Earnest JT, Holmes AC, Ebel GD, Zmasek C, Scheuermann RH, Fremont DH, Diamond MS
To Be Published
- E1 envelope glycoprotein (47 kDa, Protein from Western equine encephalitis virus)
- Western equine encephalitis virus vlp in complex with avian mxra8 receptor (495 MDa, Complex from Western equine encephalitis virus)
- Matrix remodeling-associated protein 8 (30 kDa, Protein from Asarcornis scutulata)
- E2 envelope glycoprotein (46 kDa, Protein from Western equine encephalitis virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
CryoEM structure of Western equine encephalitis virus VLP
Resolution: 4.35 Å
EM Method: Single-particle
Fitted PDBs: 8daq
Q-score: 0.3
Zimmerman O, Zimmerman MI, Nelson CA, Raju S, Errico JM, Madden EA, Hassan AO, VanBlargan LA, Kim AS, Adams LJ, Basore K, Whitener BM, Earnest JT, Holmes AC, Ebel GD, Zmasek C, Scheuermann RH, Fremont DH, Diamond MS
To Be Published
- Western equine encephalitis virus (Virus from Western equine encephalitis virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- E1 envelope glycoprotein (47 kDa, Protein from Western equine encephalitis virus)
- E2 envelope glycoprotein (46 kDa, Protein from Western equine encephalitis virus)
Resolution: 3.89 Å
EM Method: Single-particle
Fitted PDBs: 8sqn
Q-score: 0.366
Zimmerman O, Zimmerman MI, Raju S, Nelson CA, Errico JM, Madden EA, Holmes AC, Hassan AO, VanBlargan LA, Kim AS, Adams LJ, Basore K, Whitener BM, Palakurty S, Davis-Adams HG, Sun C, Gilliland Jr T, Earnest JT, Ma H, Ebel GD, Zmasek C, Scheuermann RH, Klimstra WB, Fremont DH, Diamond MS
Cell (2023) 186 pp. 4818-4833.e25 [ Pubmed: 37804831 DOI: doi:10.1016/j.cell.2023.09.007 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- E1 envelope glycoprotein (47 kDa, Protein from Western equine encephalitis virus)
- E2 envelope glycoprotein (46 kDa, Protein from Western equine encephalitis virus)
- Western equine encephalitis virus vlp in complex with a chimeric mxra8 receptor (avian d1 with mammalian d2) (7 MDa, Complex from Western equine encephalitis virus)
- Dud1mod2 chimeric mxra8 (30 kDa, Protein from Anas platyrhynchos)
CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor
Resolution: 3.92 Å
EM Method: Single-particle
Fitted PDBs: 8ewf
Q-score: 0.321
Zimmerman O, Zimmerman MI, Nelson CA, Raju S, Errico JM, Madden EA, Hassan AO, VanBlargan LA, Kim AS, Adams LJ, Basore K, Whitener BM, Earnest JT, Holmes AC, Ebel GD, Zmasek C, Scheuermann RH, Fremont DH, Diamond MS
To Be Published
- Chikungunya virus vlp in complex with a chimeric mxra8 receptor (avian d1 with mammalian d2) (495 MDa, Complex from Chikungunya virus)
- Chimeric mxra8 receptor: d1 from duck mxra8 and d2 from mouse mxra8 (30 kDa, Protein from Anas platyrhynchos)
- Spike glycoprotein e2 (46 kDa, Protein from Chikungunya virus)
- E1 envelope protein (47 kDa, Protein from Chikungunya virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)