Human Fc epsilon RI in complex with hIgE Fc (TMD disordered)
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 8k7r
Q-score: 0.452
Zhang Z, Yui M, Ohto U, Shimizu T
Sci Signal (2024) 17 pp. eadn1303-eadn1303 [ DOI: doi:10.1126/scisignal.adn1303 Pubmed: 39656861 ]
- High affinity immunoglobulin epsilon receptor subunit alpha (32 kDa, Protein from Homo sapiens)
- Ige fc (39 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human fc epsilon ri in complex with hige fc (Complex from Homo sapiens)
Human Fc epsilon RI in complex with mIgE Fc (TMD disordered)
Resolution: 3.51 Å
EM Method: Single-particle
Fitted PDBs: 8k7s
Q-score: 0.358
Zhang Z, Yui M, Ohto U, Shimizu T
Sci Signal (2024) 17 pp. eadn1303-eadn1303 [ DOI: doi:10.1126/scisignal.adn1303 Pubmed: 39656861 ]
- Fcer1a (32 kDa, Protein from Homo sapiens)
- Ige fc (40 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Human fc epsilon ri in complex with mige fc (Complex from Homo sapiens)
Mouse Fc epsilon RI in complex with mIgE Fc
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 8k7t
Q-score: 0.37
Zhang Z, Yui M, Ohto U, Shimizu T
Sci Signal (2024) 17 pp. eadn1303-eadn1303 [ DOI: doi:10.1126/scisignal.adn1303 Pubmed: 39656861 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse fc epsilon ri in complex with mige fc (Complex from Mus musculus)
- High affinity immunoglobulin epsilon receptor subunit alpha (31 kDa, Protein from Mus musculus)
- High affinity immunoglobulin epsilon receptor subunit gamma (11 kDa, Protein from Mus musculus)
- Ige fc (40 kDa, Protein from Mus musculus)
- High affinity immunoglobulin epsilon receptor subunit beta (27 kDa, Protein from Mus musculus)
Resolution: 3.87 Å
EM Method: Single-particle
Fitted PDBs: 8yrj
Q-score: 0.271
Zhang Z, Yui M, Ohto U, Shimizu T
Sci Signal (2024) 17 pp. eadn1303-eadn1303 [ DOI: doi:10.1126/scisignal.adn1303 Pubmed: 39656861 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- High affinity immunoglobulin epsilon receptor subunit gamma (11 kDa, Protein from Mus musculus)
- High affinity immunoglobulin epsilon receptor subunit alpha (31 kDa, Protein from Mus musculus)
- Mouse fc epsilon ri (Complex from Mus musculus)
- High affinity immunoglobulin epsilon receptor subunit beta (27 kDa, Protein from Mus musculus)
SARS-CoV-2 M protein dimer (long form) in complex with YN7756_1 Fab
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7vgr
Q-score: 0.504
Zhang Z, Nomura N, Muramoto Y, Ekimoto T, Uemura T, Liu K, Yui M, Kono N, Aoki J, Ikeguchi M, Noda T, Iwata S, Ohto U, Shimizu T
Nat Commun (2022) 13 pp. 4399-4399 [ Pubmed: 35931673 DOI: doi:10.1038/s41467-022-32019-3 ]
- Membrane protein (28 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Yn7756_1 fab (Complex from Mus musculus)
- Sars-cov-2 m protein dimer (long form) in complex with yn7756_1 fab (Complex)
- Yn7756_1 fab heavy chain (25 kDa, Protein from Mus musculus)
- Yn7756_1 fab light chain (24 kDa, Protein from Mus musculus)
- Membrane protein (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 M protein dimer (short form) in complex with YN7717_9 Fab
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7vgs
Q-score: 0.451
Zhang Z, Nomura N, Muramoto Y, Ekimoto T, Uemura T, Liu K, Yui M, Kono N, Aoki J, Ikeguchi M, Noda T, Iwata S, Ohto U, Shimizu T
Nat Commun (2022) 13 pp. 4399-4399 [ Pubmed: 35931673 DOI: doi:10.1038/s41467-022-32019-3 ]
- Membrane protein (28 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Yn7717_9 fab heavy chain (24 kDa, Protein from Mus musculus)
- Yn7717_9 fab (Complex from Mus musculus)
- Sars-cov-2 m protein dimer (short form) in complex with yn7717_9 fab (Complex)
- Membrane protein (Complex from Severe acute respiratory syndrome coronavirus 2)
- Yn7717_9 fab light chain (23 kDa, Protein from Mus musculus)