G115 gamma delta TCR/CD3 complex bound by OKT3 Fab
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 9cq4
Q-score: 0.464
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- T-cell surface glycoprotein cd3 zeta chain (19 kDa, Protein from Homo sapiens)
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- Okt3 fab light chain (23 kDa, Protein from Mus musculus)
- G115 tcr gamma chain (33 kDa, Protein from Homo sapiens)
- Okt3 fab heavy chain (25 kDa, Protein from Mus musculus)
- T-cell surface glycoprotein cd3 delta chain (19 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- G115 tcr delta chain (31 kDa, Protein from Homo sapiens)
G115 gamma delta TCR/CD3 complex bound by OKT3 Fab
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 9cq7
Q-score: 0.437
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- G115 tcr gamma chain (33 kDa, Protein from Homo sapiens)
- Anti tcr variable delta 2 fab heavy chain (24 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- G115 tcr delta chain (31 kDa, Protein from Homo sapiens)
- Anti tcr variable delta 2 fab light chain (23 kDa, Protein from Mus musculus)
G115 gamma delta TCR/CD3 complex bound by OKT3 Fab
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 9cq8
Q-score: 0.476
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- Anti tcr variable delta 1 fab heavy chain (24 kDa, Protein from Mus musculus)
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- Anti tcr variable delta 1 fab light chain (23 kDa, Protein from Mus musculus)
- 9c2 tcr delta chain (31 kDa, Protein from Homo sapiens)
- 9c2 tcr gamma chain (33 kDa, Protein from Homo sapiens)
Dimeric 9C2 gamma delta TCR bound by Fab 3
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 9cql
Q-score: 0.467
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- Beta-d-mannopyranose (180 Da, Ligand)
- Anti tcr variable delta 1 fab light chain fab 3 (24 kDa, Protein from Mus musculus)
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- Anti tcr variable delta 1 fab heavy chain fab 3 (24 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 9c2 tcr delta chain (31 kDa, Protein from Homo sapiens)
- 9c2 tcr gamma chain (33 kDa, Protein from Homo sapiens)
Cryo-EM structure of human type I OSM receptor complex: model for full extracellular assembly
Resolution: 3.99 Å
EM Method: Single-particle
Fitted PDBs: 8v29
Q-score: 0.219
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ DOI: doi:10.1038/s41467-024-54124-1 Pubmed: 39532904 ]
- Interleukin-6 receptor subunit beta (71 kDa, Protein from Homo sapiens)
- Human osm in complex with gp130 and lifr (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Oncostatin-m (22 kDa, Protein from Homo sapiens)
- Leukemia inhibitory factor receptor (92 kDa, Protein from Homo sapiens)
Cryo-EM structure of human type I OSM receptor complex: model for assembly core region
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 8v2a
Q-score: 0.438
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ DOI: doi:10.1038/s41467-024-54124-1 Pubmed: 39532904 ]
- Interleukin-6 receptor subunit beta (71 kDa, Protein from Homo sapiens)
- Human osm in complex with gp130 and lifr (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Oncostatin-m (22 kDa, Protein from Homo sapiens)
- Human osm (Complex from Homo sapiens)
- Leukemia inhibitory factor receptor (92 kDa, Protein from Homo sapiens)
- Gp130 and lifr (Complex from Homo sapiens)
Cryo-EM structure of mouse type II OSM receptor complex: model for full extracellular assembly
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 8v2b
Q-score: 0.31
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ DOI: doi:10.1038/s41467-024-54124-1 Pubmed: 39532904 ]
- Oncostatin-m-specific receptor subunit beta (82 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse osm in complex with gp130 and osmr (Complex)
- Interleukin-6 receptor subunit beta (70 kDa, Protein from Mus musculus)
- Oncostatin-m (20 kDa, Protein from Mus musculus)
Cryo-EM structure of mouse type II OSM receptor complex: model for assembly core region
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 8v2c
Q-score: 0.479
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ DOI: doi:10.1038/s41467-024-54124-1 Pubmed: 39532904 ]
- Oncostatin-m-specific receptor subunit beta (82 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mouse osm in complex with gp130 and osmr (Complex)
- Interleukin-6 receptor subunit beta (70 kDa, Protein from Mus musculus)
- Oncostatin-m (20 kDa, Protein from Mus musculus)
Structure of Apo CXCR4/Gi complex
Resolution: 2.72 Å
EM Method: Single-particle
Fitted PDBs: 8u4n
Q-score: 0.56
Saotome K, McGoldrick LL, Ho JH, Ramlall TF, Shah S, Moore MJ, Kim JH, Leidich R, Olson WC, Franklin MC
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01397-1 Pubmed: 39313635 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (38 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (41 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Apo cxcr4/gi complex (Complex from Homo sapiens)
- C-x-c chemokine receptor type 4 (71 kDa, Protein from Homo sapiens)
Structure of CXCL12-bound CXCR4/Gi complex
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 8u4o
Q-score: 0.489
Saotome K, McGoldrick LL, Ho JH, Ramlall TF, Shah S, Moore MJ, Kim JH, Leidich R, Olson WC, Franklin MC
Nat Struct Mol Biol (2024) [ DOI: doi:10.1038/s41594-024-01397-1 Pubmed: 39313635 ]
- Guanine nucleotide-binding protein g(i)/g(s)/g(o) subunit gamma-2 (7 kDa, Protein from Homo sapiens)
- Cxcl12-bound cxcr4/gi complex (Complex from Homo sapiens)
- Stromal cell-derived factor 1 (7 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i)/g(s)/g(t) subunit beta-1 (38 kDa, Protein from Homo sapiens)
- Guanine nucleotide-binding protein g(i) subunit alpha-1 (41 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- C-x-c chemokine receptor type 4 (71 kDa, Protein from Homo sapiens)