G115 gamma delta TCR/CD3 complex bound by OKT3 Fab
Resolution: 3.27 Å
EM Method: Single-particle
Fitted PDBs: 9cq4
Q-score: 0.464
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- G115 tcr delta chain (31 kDa, Protein from Homo sapiens)
- G115 tcr gamma chain (33 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 zeta chain (19 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- Okt3 fab heavy chain (25 kDa, Protein from Mus musculus)
- T-cell surface glycoprotein cd3 delta chain (19 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- Okt3 fab light chain (23 kDa, Protein from Mus musculus)
G115 gamma delta TCR/CD3 complex bound by OKT3 Fab
Resolution: 3.21 Å
EM Method: Single-particle
Fitted PDBs: 9cq7
Q-score: 0.437
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- G115 tcr delta chain (31 kDa, Protein from Homo sapiens)
- G115 tcr gamma chain (33 kDa, Protein from Homo sapiens)
- Anti tcr variable delta 2 fab heavy chain (24 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- Anti tcr variable delta 2 fab light chain (23 kDa, Protein from Mus musculus)
G115 gamma delta TCR/CD3 complex bound by OKT3 Fab
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 9cq8
Q-score: 0.476
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- Anti tcr variable delta 1 fab heavy chain (24 kDa, Protein from Mus musculus)
- Anti tcr variable delta 1 fab light chain (23 kDa, Protein from Mus musculus)
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- 9c2 tcr gamma chain (33 kDa, Protein from Homo sapiens)
- 9c2 tcr delta chain (31 kDa, Protein from Homo sapiens)
Dimeric 9C2 gamma delta TCR bound by Fab 3
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 9cql
Q-score: 0.467
Hoque M, Grigg JB, Ramlall T, Jones J, McGoldrick LL, Lin JC, Olson WC, Smith E, Franklin MC, Zhang T, Saotome K
Nat Commun (2025) 16 pp. 318-318 [ DOI: doi:10.1038/s41467-024-55467-5 Pubmed: 39747888 ]
- Beta-d-mannopyranose (180 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Anti tcr variable delta 1 fab heavy chain fab 3 (24 kDa, Protein from Mus musculus)
- G115 gamma delta tcr/cd3 complex bound by okt3 fab (Complex from Homo sapiens)
- 9c2 tcr gamma chain (33 kDa, Protein from Homo sapiens)
- Anti tcr variable delta 1 fab light chain fab 3 (24 kDa, Protein from Mus musculus)
- 9c2 tcr delta chain (31 kDa, Protein from Homo sapiens)
Cryo-EM structure of human type I OSM receptor complex: model for full extracellular assembly
Resolution: 3.99 Å
EM Method: Single-particle
Fitted PDBs: 8v29
Q-score: 0.219
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Interleukin-6 receptor subunit beta (71 kDa, Protein from Homo sapiens)
- Leukemia inhibitory factor receptor (92 kDa, Protein from Homo sapiens)
- Human osm in complex with gp130 and lifr (Complex)
- Oncostatin-m (22 kDa, Protein from Homo sapiens)
Cryo-EM structure of human type I OSM receptor complex: model for assembly core region
Resolution: 3.59 Å
EM Method: Single-particle
Fitted PDBs: 8v2a
Q-score: 0.438
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- Human osm (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Interleukin-6 receptor subunit beta (71 kDa, Protein from Homo sapiens)
- Leukemia inhibitory factor receptor (92 kDa, Protein from Homo sapiens)
- Gp130 and lifr (Complex from Homo sapiens)
- Human osm in complex with gp130 and lifr (Complex)
- Oncostatin-m (22 kDa, Protein from Homo sapiens)
Cryo-EM structure of mouse type II OSM receptor complex: model for full extracellular assembly
Resolution: 3.67 Å
EM Method: Single-particle
Fitted PDBs: 8v2b
Q-score: 0.31
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- Interleukin-6 receptor subunit beta (70 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Oncostatin-m-specific receptor subunit beta (82 kDa, Protein from Mus musculus)
- Oncostatin-m (20 kDa, Protein from Mus musculus)
- Mouse osm in complex with gp130 and osmr (Complex)
Cryo-EM structure of mouse type II OSM receptor complex: model for assembly core region
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 8v2c
Q-score: 0.479
Zhou Y, Stevis PE, Cao J, Ehrlich G, Jones J, Rafique A, Sleeman MW, Olson WC, Franklin MC
Nat Commun (2024) 15 pp. 9776-9776 [ Pubmed: 39532904 DOI: doi:10.1038/s41467-024-54124-1 ]
- Interleukin-6 receptor subunit beta (70 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Oncostatin-m-specific receptor subunit beta (82 kDa, Protein from Mus musculus)
- Oncostatin-m (20 kDa, Protein from Mus musculus)
- Mouse osm in complex with gp130 and osmr (Complex)
CryoEM structure of PN45545 TCR-CD3 complex
Resolution: 3.04 Å
EM Method: Single-particle
Fitted PDBs: 8es7
Q-score: 0.531
Saotome K, Dudgeon D, Colotti K, Moore MJ, Jones J, Zhou Y, Rafique A, Yancopoulos GD, Murphy AJ, Lin JC, Olson WC, Franklin MC
Nat Commun (2023) 14 pp. 2401-2401 [ Pubmed: 37100770 DOI: doi:10.1038/s41467-023-37532-7 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- T-cell surface glycoprotein cd3 zeta chain (19 kDa, Protein from Homo sapiens)
- Pn45545 tcr alpha chain (30 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- Pn45545 tcr beta chain (35 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 delta chain (19 kDa, Protein from Homo sapiens)
- Cholesterol hemisuccinate (486 Da, Ligand)
- Pn45545 tcr-cd3 complex (Complex from Homo sapiens)
CryoEM structure of PN45545 TCR-CD3 in complex with HLA-A2 MAGEA4 (230-239)
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 8es8
Q-score: 0.537
Saotome K, Dudgeon D, Colotti K, Moore MJ, Jones J, Zhou Y, Rafique A, Yancopoulos GD, Murphy AJ, Lin JC, Olson WC, Franklin MC
Nat Commun (2023) 14 pp. 2401-2401 [ Pubmed: 37100770 DOI: doi:10.1038/s41467-023-37532-7 ]
- Melanoma-associated antigen 4 (1 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- T-cell surface glycoprotein cd3 zeta chain (19 kDa, Protein from Homo sapiens)
- Pn45545 tcr alpha chain (30 kDa, Protein from Homo sapiens)
- Beta-2-microglobulin (11 kDa, Protein from Homo sapiens)
- Mhc class i antigen (32 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 epsilon chain (23 kDa, Protein from Homo sapiens)
- Pn45545 tcr beta chain (35 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd3 delta chain (19 kDa, Protein from Homo sapiens)
- Cholesterol hemisuccinate (486 Da, Ligand)
- T-cell surface glycoprotein cd3 gamma chain (20 kDa, Protein from Homo sapiens)
- Pn45545 tcr-cd3 complex bound to hla-a2 magea4 (230-239) with anti-beta-2-microglobulin fab (Complex from Homo sapiens)