Resolution: 2.24 Å
EM Method: Single-particle
Fitted PDBs: 9es8
Q-score: 0.626
Pintscher S, Pietras R, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A
Nat Plants (2024) 10 pp. 1814-1825 [ Pubmed: 39362993 DOI: doi:10.1038/s41477-024-01804-x ]
- Cytochrome b6-f complex iron-sulfur subunit, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- Undecyl-maltoside (496 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Cytochrome b6 (24 kDa, Protein from Spinacia oleracea)
- Thylakoid soluble phosphoprotein (10 kDa, Protein from Spinacia oleracea)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Cytochrome b6-f complex subunit 7 (12 kDa, Protein from Spinacia oleracea)
- Heme c (618 Da, Ligand)
- Water (18 Da, Ligand)
- Cytochrome b6-f complex subunit 6 (3 kDa, Protein from Spinacia oleracea)
- Beta-carotene (536 Da, Ligand)
- Decylplastoquinone (276 Da, Ligand)
- Cytochrome b6f complex with decylplastoquinol bound at quinone reduction site (220 kDa, Complex from Spinacia oleracea)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Cytochrome b6-f complex subunit 8 (3 kDa, Protein from Spinacia oleracea)
- Cytochrome b6-f complex subunit 4 (17 kDa, Protein from Spinacia oleracea)
- Cytochrome b6-f complex subunit 5 (4 kDa, Protein from Spinacia oleracea)
- Cytochrome f (35 kDa, Protein from Spinacia oleracea)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Resolution: 2.33 Å
EM Method: Single-particle
Fitted PDBs: 9es9
Q-score: 0.618
Pintscher S, Pietras R, Mielecki B, Szwalec M, Wojcik-Augustyn A, Indyka P, Rawski M, Koziej L, Jaciuk M, Wazny G, Glatt S, Osyczka A
Nat Plants (2024) 10 pp. 1814-1825 [ Pubmed: 39362993 DOI: doi:10.1038/s41477-024-01804-x ]
- Cytochrome b6-f complex iron-sulfur subunit, chloroplastic (24 kDa, Protein from Spinacia oleracea)
- Undecyl-maltoside (496 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Cytochrome b6 (24 kDa, Protein from Spinacia oleracea)
- Thylakoid soluble phosphoprotein (10 kDa, Protein from Spinacia oleracea)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Heme c (618 Da, Ligand)
- Water (18 Da, Ligand)
- Cytochrome b6-f complex subunit 7 (12 kDa, Protein from Spinacia oleracea)
- Cytochrome b6-f complex subunit 6 (3 kDa, Protein from Spinacia oleracea)
- Beta-carotene (536 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Cytochrome b6f complex inhibited with dbmib (2,5-dibromo-3-isopropyl-6-methylbenzo-1,4-quinone) (220 kDa, Complex from Spinacia oleracea)
- Cytochrome b6-f complex subunit 8 (3 kDa, Protein from Spinacia oleracea)
- Cytochrome b6-f complex subunit 4 (17 kDa, Protein from Spinacia oleracea)
- Cytochrome b6-f complex subunit 5 (4 kDa, Protein from Spinacia oleracea)
- Cytochrome f (35 kDa, Protein from Spinacia oleracea)
- 2,5-dibromo-3-isopropyl-6-methylbenzo-1,4-quinone (321 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7qrm
Q-score: 0.617
Sarewicz M, Szwalec M, Pintscher S, Indyka P, Rawski M, Pietras R, Mielecki B, Koziej L, Jaciuk M, Glatt S, Osyczka A
Sci Adv (2023) 9 pp. eadd9688-eadd9688 [ Pubmed: 36638176 DOI: doi:10.1126/sciadv.add9688 ]
- Cytochrome f (35 kDa, Protein from spinach)
- Cytochrome b6-f complex iron-sulfur subunit, chloroplastic (24 kDa, Protein from spinach)
- Cytochrome b6 (24 kDa, Protein from spinach)
- Beta-carotene (536 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Undecyl-maltoside (496 Da, Ligand)
- Cytochrome b6-f complex subunit 8 (3 kDa, Protein from spinach)
- Cytochrome b6-f complex subunit 4 (17 kDa, Protein from spinach)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Heme c (618 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Cytochrome b6-f complex subunit 6 (3 kDa, Protein from spinach)
- Cytochrome b6f complex (220 kDa, Complex from Spinacia oleracea)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Cytochrome b6-f complex subunit 5 (4 kDa, Protein from spinach)
- (1s)-2-{[{[(2r)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl stearate (751 Da, Ligand)
- Cytochrome b6-f complex subunit 7 (3 kDa, Protein from spinach)
Resolution: 2.13 Å
EM Method: Single-particle
Fitted PDBs: 7zyv
Q-score: 0.644
Sarewicz M, Szwalec M, Pintscher S, Indyka P, Rawski M, Pietras R, Mielecki B, Koziej L, Jaciuk M, Glatt S, Osyczka A
Sci Adv (2023) 9 pp. eadd9688-eadd9688 [ Pubmed: 36638176 DOI: doi:10.1126/sciadv.add9688 ]
- Cytochrome f (35 kDa, Protein from spinach)
- Cytochrome b6-f complex iron-sulfur subunit, chloroplastic (24 kDa, Protein from spinach)
- Cytochrome b6 (24 kDa, Protein from spinach)
- Beta-carotene (536 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Undecyl-maltoside (496 Da, Ligand)
- Cytochrome b6-f complex subunit 8 (3 kDa, Protein from spinach)
- Cytochrome b6-f complex subunit 4 (17 kDa, Protein from spinach)
- Protoporphyrin ix containing fe (616 Da, Ligand)
- Heme c (618 Da, Ligand)
- 1,2-di-o-acyl-3-o-[6-deoxy-6-sulfo-alpha-d-glucopyranosyl]-sn-glycerol (795 Da, Ligand)
- Cytochrome b6-f complex subunit 6 (3 kDa, Protein from spinach)
- Cytochrome b6f complex (220 kDa, Complex from Spinacia oleracea)
- 2,3-dimethyl-5-(3,7,11,15,19,23,27,31,35-nonamethyl-2,6,10,14,18,22,26,30,34-hexatriacontanonaenyl-2,5-cyclohexadiene-1,4-dione-2,3-dimethyl-5-solanesyl-1,4-benzoquinone (749 Da, Ligand)
- Thylakoid soluble phosphoprotein (10 kDa, Protein from spinach)
- Chlorophyll a (893 Da, Ligand)
- Cytochrome b6-f complex subunit 5 (4 kDa, Protein from spinach)
- Cytochrome b6-f complex subunit 7 (12 kDa, Protein from spinach)