Structure of C. thermophilum RNA exosome core
Resolution: 3.19 Å
EM Method: Single-particle
Fitted PDBs: 8r1o
Q-score: 0.489
Liebau J, Lazzaretti D, Bichler A, Pilsl M, Sprangers R
bioRxiv (2024) [ DOI: doi:10.1101/2024.01.28.577622 ]
- Exosome complex component mtr3 (30 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative exosome complex protein (38 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Exoribonuclease-like protein (39 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Exoribonuclease phosphorolytic domain-containing protein (29 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Putative exosome 3'->5 protein (23 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Rrp45 (32 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Exoribonuclease phosphorolytic domain-containing protein (43 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Ribosomal rna-processing protein 40 (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Exoribonuclease phosphorolytic domain-containing protein (27 kDa, Protein from Thermochaetoides thermophila DSM 1495)
- Rna exosome core (exo9) (294 kDa, Complex from Thermochaetoides thermophila DSM 1495)
Cryo-EM structure of Pyrococcus furiosus transcription elongation complex
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8cro
Q-score: 0.462
Tarau D, Grunberger F, Pilsl M, Reichelt R, Heiss F, Konig S, Urlaub H, Hausner W, Engel C, Grohmann D
Nucleic Acids Res (2024) 52 pp. 6017-6035 [ Pubmed: 38709902 DOI: doi:10.1093/nar/gkae282 ]
- Dna-directed rna polymerase subunit rpo1n (103 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Nucleotide strands (Complex from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo1c (44 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit beta (127 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna template strand (6 kDa, DNA from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo11 (11 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Pyrococcus furiosus rna polymerase (Complex from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo5 (9 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo7 (21 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Transcription elongation complex (tec) (Complex)
- Dna-directed rna polymerase subunit rpo4 (14 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo6 (6 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Magnesium ion (24 Da, Ligand)
- Zinc ion (65 Da, Ligand)
- Rna (2 kDa, RNA from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo3 (29 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo12 (5 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna-directed rna polymerase subunit rpo10 (7 kDa, Protein from Pyrococcus furiosus DSM 3638)
- Dna non-template strand (2 kDa, DNA from Pyrococcus furiosus DSM 3638)