Bacteriophage SU10 virion (C1)
Resolution: 7.4 Å
EM Method: Single-particle
Fitted PDBs: 7z4b
Q-score: 0.194
Siborova M, Fuzik T, Prochazkova M, Novacek J, Benesik M, Nilsson AS, Plevka P
Nat Commun (2022) 13 pp. 5622-5622 [ Pubmed: 36153309 DOI: doi:10.1038/s41467-022-33305-w ]
- Adaptor (28 kDa, Protein from Escherichia phage vB EcoP SU10)
- Major head protein (38 kDa, Protein from Escherichia phage vB EcoP SU10)
- Surface protein (110 kDa, Protein from Escherichia phage vB EcoP SU10)
- Escherichia phage vb_ecop_su10 (32 MDa, Virus from Escherichia phage vB EcoP SU10)
- Putative tail tip fiber protein (35 kDa, Protein from Escherichia phage vB EcoP SU10)
- Putative structural protein (29 kDa, Protein from Escherichia phage vB EcoP SU10)
- Putative tail fiber (83 kDa, Protein from Escherichia phage vB EcoP SU10)
- Portal protein (85 kDa, Protein from Escherichia phage vB EcoP SU10)
The capsid of bacteriophage SU10.
Resolution: 4.2 Å
EM Method: Single-particle
Fitted PDBs: 7z49
Q-score: -0.007
Siborova M, Fuzik T, Prochazkova M, Novacek J, Benesik M, Nilsson AS, Plevka P
Nat Commun (2022) 13 pp. 5622-5622 [ Pubmed: 36153309 DOI: doi:10.1038/s41467-022-33305-w ]
- Major head protein (38 kDa, Protein from Escherichia phage vB EcoP SU10)
- Escherichia phage vb_ecop_su10 (27 MDa, Virus from Escherichia phage vB EcoP SU10)
Virion of Leishmania RNA virus 1
Resolution: 3.63 Å
EM Method: Single-particle
Fitted PDBs: 7ns2
Q-score: 0.463
Prochazkova M, Fuzik T, Grybchuk D, Yurchenko V, Plevka P
Virology (2022) 577 pp. 149-154 [ DOI: doi:10.1016/j.virol.2022.09.014 Pubmed: 36371873 ]
- Capsid protein (86 kDa, Protein from Leishmania RNA virus 1 - LgM5313)
- Leishmania rna virus 1 (9 MDa, Virus from Leishmania RNA virus 1)
Saccharomyces cerevisiae L-BC virus, open particle, asymmetric reconstruction
Resolution: 16.0 Å
EM Method: Single-particle
Fitted PDBs: 7zts
Q-score: 0.051
Grybchuk D, Prochazkova M, Fuzik T, Konovalovas A, Serva S, Yurchenko V, Plevka P
Commun Biol (2022) 5 pp. 847-847 [ Pubmed: 35986212 DOI: doi:10.1038/s42003-022-03793-z ]
Empty capsid of Saccharomyces cerevisiae virus L-BCLa
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7qwx
Q-score: 0.551
Grybchuk D, Prochazkova M, Fuzik T, Konovalovas A, Serva S, Yurchenko V, Plevka P
Commun Biol (2022) 5 pp. 847-847 [ Pubmed: 35986212 DOI: doi:10.1038/s42003-022-03793-z ]
Full capsid of Saccharomyces cerevisiae virus L-BCLa
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7qwz
Q-score: 0.477
Grybchuk D, Prochazkova M, Fuzik T, Konovalovas A, Serva S, Yurchenko V, Plevka P
Commun Biol (2022) 5 pp. 847-847 [ Pubmed: 35986212 DOI: doi:10.1038/s42003-022-03793-z ]
Saccharomyces cerevisiae L-BC virus, open particle, C5 reconstruction
Resolution: 10.0 Å
EM Method: Single-particle
Fitted PDBs: 7zuf
Q-score: 0.066
Grybchuk D, Prochazkova M, Fuzik T, Konovalovas A, Serva S, Yurchenko V, Plevka P
Commun Biol (2022) 5 pp. 847-847 [ Pubmed: 35986212 DOI: doi:10.1038/s42003-022-03793-z ]
Central part (C10) of bacteriophage SU10 capsid
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7z45
Q-score: 0.457
Siborova M, Fuzik T, Prochazkova M, Novacek J, Benesik M, Nilsson AS, Plevka P
Nat Commun (2022) 13 pp. 5622-5622 [ Pubmed: 36153309 DOI: doi:10.1038/s41467-022-33305-w ]
- Major head protein (38 kDa, Protein from Escherichia phage vB EcoP SU10)
- Escherichia phage vb_ecop_su10 (9 MDa, Virus from Escherichia phage vB EcoP SU10)
Top part (C5) of bacteriophage SU10 capsid
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7z46
Q-score: 0.383
Siborova M, Fuzik T, Prochazkova M, Novacek J, Benesik M, Nilsson AS, Plevka P
Nat Commun (2022) 13 pp. 5622-5622 [ Pubmed: 36153309 DOI: doi:10.1038/s41467-022-33305-w ]
- Escherichia phage vb_ecop_su10 (5 MDa, Virus from Escherichia phage vB EcoP SU10)
- Major head protein (38 kDa, Protein from Escherichia phage vB EcoP SU10)
Bacteriophage SU10 tail and bottom part of the capsid (C1)
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 7z4a
Q-score: 0.197
Siborova M, Fuzik T, Prochazkova M, Novacek J, Benesik M, Nilsson AS, Plevka P
Nat Commun (2022) 13 pp. 5622-5622 [ Pubmed: 36153309 DOI: doi:10.1038/s41467-022-33305-w ]
- Surface protein (110 kDa, Protein from Escherichia phage vB EcoP SU10)
- Escherichia phage vb_ecop_su10 (4 MDa, Virus from Escherichia phage vB EcoP SU10)
- Major head protein (38 kDa, Protein from Escherichia phage vB EcoP SU10)
- Putative tail fiber (83 kDa, Protein from Escherichia phage vB EcoP SU10)
- Adaptor protein (28 kDa, Protein from Escherichia phage vB EcoP SU10)
- Portal protein (85 kDa, Protein from Escherichia phage vB EcoP SU10)