Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 7qgg
Q-score: 0.5
J Mol Biol (2022) 434 pp. 167801-167801 [ Pubmed: 36038000 DOI: doi:10.1016/j.jmb.2022.167801 ]
- 40s ribosomal protein s28 (7 kDa, Protein from Rattus norvegicus)
- Rna (157-mer) (50 kDa, RNA from Rattus norvegicus)
- 60s ribosomal protein l11 (20 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l17 (21 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l23 (14 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l8 (28 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s3a (30 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s17 (15 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l34 (13 kDa, Protein from Rattus norvegicus)
- Ubiquitin-like domain-containing protein (6 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s15a (14 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l6 (33 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l7 (30 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s29 (6 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s6 (28 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s20 (13 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l13a (23 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein sa (32 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s11 (18 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s2 (31 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s4, x isoform (29 kDa, Protein from Rattus norvegicus)
- Ala-ala-lys-ala (360 Da, Protein from Rattus norvegicus)
- 60s ribosomal protein l39 (6 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s12 (14 kDa, Protein from Rattus norvegicus)
- Rna (4803-mer) (1 MDa, RNA from Rattus norvegicus)
- 60s ribosomal protein l27a (16 kDa, Protein from Rattus norvegicus)
- Rna (76-mer) (24 kDa, RNA from Rattus norvegicus)
- Zinc ion (65 Da, Ligand)
- 60s ribosomal protein l18 (21 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s8 (24 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s23 (15 kDa, Protein from Rattus norvegicus)
- Ribosomal protein l19 (23 kDa, Protein from Rattus norvegicus)
- Rna (121-mer) (38 kDa, RNA from Rattus norvegicus)
- 60s ribosomal protein l21 (18 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l29 (17 kDa, Protein from Rattus norvegicus)
- Ribosomal protein l37 (11 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l27 (15 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l10 (24 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l41 (3 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l35a (12 kDa, Protein from Rattus norvegicus)
- Ubiquitin-40s ribosomal protein s27a (17 kDa, Protein from Rattus norvegicus)
- Rna (76-mer) (24 kDa, RNA from Rattus norvegicus)
- 40s ribosomal protein s21 (9 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l35 (14 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l9 (21 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l18a (20 kDa, Protein from Rattus norvegicus)
- Rna (5'-d(p*()p*()p*()p*())-r(p*up*up*ap*cp*gp*gp*cp*gp*gp*up*()p*()p*()p*()p*()p*())-3') (6 kDa, RNA from Rattus norvegicus)
- 40s ribosomal protein s26 (13 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l14 (23 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s27 (9 kDa, Protein from Rattus norvegicus)
- Ribosomal protein l15 (24 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l38 (8 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s9 (22 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s15 (17 kDa, Protein from Rattus norvegicus)
- Water (18 Da, Ligand)
- Rps16 protein (16 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l26 (17 kDa, Protein from Rattus norvegicus)
- Rna (1872-mer) (604 kDa, RNA from Rattus norvegicus)
- 60s ribosomal protein l10a (24 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l13 (24 kDa, Protein from Rattus norvegicus)
- Ribosome structure in the rat cortex-hippocampus derived neuronal rna granules. (Complex from Rattus norvegicus)
- 60s ribosomal protein l4 (47 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s18 (17 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s5 (22 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l36 (12 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l23a (17 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s10 (18 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l30 (12 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s7 (22 kDa, Protein from Rattus norvegicus)
- Ubiquitin-60s ribosomal protein l40 (14 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l31 (14 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l7a (30 kDa, Protein from Rattus norvegicus)
- Magnesium ion (24 Da, Ligand)
- 60s ribosomal protein l5 (34 kDa, Protein from Rattus norvegicus)
- Receptor of activated protein c kinase 1 (35 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s19 (16 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s25 (13 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l37a (10 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s3 (26 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l3 (46 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s24 (15 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l32 (15 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s14 (16 kDa, Protein from Rattus norvegicus)
- 40s ribosomal protein s13 (17 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l24 (17 kDa, Protein from Rattus norvegicus)
- Ribosomal protein l36a (12 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l22 (14 kDa, Protein from Rattus norvegicus)
- 60s ribosomal protein l28 (15 kDa, Protein from Rattus norvegicus)
Neuronal RNA granules are ribosome complexes stalled at the pre-translocation state
J Mol Biol (2022) 434 pp. 167801-167801 [ Pubmed: 36038000 DOI: doi:10.1016/j.jmb.2022.167801 ]