Structure of E6AP-E6 complex in Att1 state
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8jrn
Q-score: 0.531
Wang Z, Fan F, Li Z, Ye F, Wang Q, Gao R, Qiu J, Lv Y, Lin M, Xu W, Luo C, Yu X
Nat Commun (2024) 15 pp. 3531-3531 [ Pubmed: 38670961 DOI: doi:10.1038/s41467-024-47586-w ]
- E6ap-e6 complex (Complex from Homo sapiens)
- Protein e6 (19 kDa, Protein from Human papillomavirus 16)
- Ubiquitin-protein ligase e3a (100 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Structure of E6AP-E6 complex in Att2 state
Resolution: 3.01 Å
EM Method: Single-particle
Fitted PDBs: 8jro
Q-score: 0.492
Wang Z, Fan F, Li Z, Ye F, Wang Q, Gao R, Qiu J, Lv Y, Lin M, Xu W, Luo C, Yu X
Nat Commun (2024) 15 pp. 3531-3531 [ Pubmed: 38670961 DOI: doi:10.1038/s41467-024-47586-w ]
- E6ap-e6 complex (Complex from Homo sapiens)
- Protein e6 (19 kDa, Protein from Human papillomavirus 16)
- Ubiquitin-protein ligase e3a (100 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Structure of E6AP-E6 complex in Att3 state
Resolution: 3.58 Å
EM Method: Single-particle
Fitted PDBs: 8jrp
Q-score: 0.34
Wang Z, Fan F, Li Z, Ye F, Wang Q, Gao R, Qiu J, Lv Y, Lin M, Xu W, Luo C, Yu X
Nat Commun (2024) 15 pp. 3531-3531 [ Pubmed: 38670961 DOI: doi:10.1038/s41467-024-47586-w ]
- Protein e6 (17 kDa, Protein from Human papillomavirus 16)
- E6ap-e6 complex (Complex from Homo sapiens)
- Ubiquitin-protein ligase e3a (100 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Structure of E6AP-E6 complex in Det1 state
Resolution: 4.15 Å
EM Method: Single-particle
Fitted PDBs: 8jrq
Q-score: 0.186
Wang Z, Fan F, Li Z, Ye F, Wang Q, Gao R, Qiu J, Lv Y, Lin M, Xu W, Luo C, Yu X
Nat Commun (2024) 15 pp. 3531-3531 [ Pubmed: 38670961 DOI: doi:10.1038/s41467-024-47586-w ]
- E6ap-e6 complex (Complex from Homo sapiens)
- Protein e6 (19 kDa, Protein from Human papillomavirus 16)
- Ubiquitin-protein ligase e3a (100 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Structure of E6AP-E6 complex in Det2 state
Resolution: 4.35 Å
EM Method: Single-particle
Fitted PDBs: 8jrr
Q-score: 0.164
Wang Z, Fan F, Li Z, Ye F, Wang Q, Gao R, Qiu J, Lv Y, Lin M, Xu W, Luo C, Yu X
Nat Commun (2024) 15 pp. 3531-3531 [ Pubmed: 38670961 DOI: doi:10.1038/s41467-024-47586-w ]
- Ubiquitin-protein ligase e3a (100 kDa, Protein from Homo sapiens)
- E6ap-e6 complex (Complex from Homo sapiens)
- Protein e6 (16 kDa, Protein from Human papillomavirus 16)
- Zinc ion (65 Da, Ligand)
Structure of human full-length E6AP
Wang Z, Fan F, Li Z, Ye F, Wang Q, Gao R, Qiu J, Lv Y, Lin M, Xu W, Luo C, Yu X
Nat Commun (2024) 15 pp. 3531-3531 [ Pubmed: 38670961 DOI: doi:10.1038/s41467-024-47586-w ]
- Ubiquitin-protein ligase e3a (100 kDa, Protein from Homo sapiens)
- E6ap (Complex from Homo sapiens)
Structure of STING SAVI-related mutant V147L
Resolution: 3.65 Å
EM Method: Single-particle
Fitted PDBs: 8gsz
Q-score: 0.445
human STING With agonist HB3089
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 8gt6
Q-score: 0.443
Xie Z, Wang Z, Fan F, Zhou J, Hu Z, Wang Q, Wang X, Zeng Q, Zhang Y, Qiu J, Zhou X, Xu H, Bai H, Zhan Z, Ding J, Zhang H, Duan W, Yu X, Geng M
Cell Discov (2022) 8 pp. 133-133 [ Pubmed: 36513640 DOI: doi:10.1038/s41421-022-00481-4 ]
- Stimulator of interferon genes protein (42 kDa, Protein from Homo sapiens)
- Human sting with agonist hb3089 (Complex from Homo sapiens)
- 1-[(2e)-4-{5-carbamoyl-2-[(1-ethyl-3-methyl-1h-pyrazole-5-carbonyl)amino]-7-[3-(morpholin-4-yl)propoxy]-1h-benzimidazol-1-yl}but-2-en-1-yl]-2-[(1-ethyl-3-methyl-1h-pyrazole-5-carbonyl)amino]-7-methyl-1h-furo[3,2-e]benzimidazole-5-carboxamide (873 Da, Ligand)
The mitochondrial SAM complex from S.cere
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7btw
Q-score: 0.513
Takeda H, Tsutsumi A, Nishizawa T, Lindau C, Busto JV, Wenz LS, Ellenrieder L, Imai K, Straub SP, Mossmann W, Qiu J, Yamamori Y, Tomii K, Suzuki J, Murata T, Ogasawara S, Nureki O, Becker T, Pfanner N, Wiedemann N, Kikkawa M, Endo T
Nature (2021) 590 pp. 163-169 [ DOI: doi:10.1038/s41586-020-03113-7 Pubmed: 33408415 ]
- Sam complex (Complex from Saccharomyces cerevisiae)
- Mitochondrial outer membrane beta-barrel protein (41 kDa, Protein from Saccharomyces cerevisiae)
- Sam37 isoform 1 (37 kDa, Protein from Saccharomyces cerevisiae)
- Sorting assembly machinery 35 kda subunit (37 kDa, Protein from Saccharomyces cerevisiae)
The mitochondrial SAM-Mdm10 supercomplex in GDN micelle from S.cere
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7btx
Q-score: 0.586
Takeda H, Tsutsumi A, Nishizawa T, Lindau C, Busto JV, Wenz LS, Ellenrieder L, Imai K, Straub SP, Mossmann W, Qiu J, Yamamori Y, Tomii K, Suzuki J, Murata T, Ogasawara S, Nureki O, Becker T, Pfanner N, Wiedemann N, Kikkawa M, Endo T
Nature (2021) 590 pp. 163-169 [ DOI: doi:10.1038/s41586-020-03113-7 Pubmed: 33408415 ]
- Sam-mdm10 complex (Complex from Saccharomyces cerevisiae)
- Mitochondrial outer membrane beta-barrel protein (41 kDa, Protein from Saccharomyces cerevisiae)
- Sorting assembly machinery 37 kda subunit (37 kDa, Protein from Saccharomyces cerevisiae)
- Sorting assembly machinery 35 kda subunit (37 kDa, Protein from Saccharomyces cerevisiae)
- Mdm10 isoform 1 (56 kDa, Protein from Saccharomyces cerevisiae)