Vaccinia C16 N-terminal domains
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 8ag3
Q-score: 0.464
Rivera-Calzada A, Arribas-Bosacoma R, Ruiz-Ramos A, Escudero-Bravo P, Boskovic J, Fernandez-Leiro R, Oliver AW, Pearl LH, Llorca O
Nat Commun (2022) 13 pp. 7062-7062 [ Pubmed: 36400800 DOI: doi:10.1038/s41467-022-34843-z ]
- C16 n-terminal domains in the c16-ku70/ku80 complex (230 kDa, Complex from Vaccinia virus)
- Protein c10 (42 kDa, Protein from Vaccinia virus Western Reserve)
Vaccinia C16 protein bound to Ku70/Ku80
Resolution: 2.46 Å
EM Method: Single-particle
Fitted PDBs: 8ag4
Q-score: 0.551
Rivera-Calzada A, Arribas-Bosacoma R, Ruiz-Ramos A, Escudero-Bravo P, Boskovic J, Fernandez-Leiro R, Oliver AW, Pearl LH, Llorca O
Nat Commun (2022) 13 pp. 7062-7062 [ Pubmed: 36400800 DOI: doi:10.1038/s41467-022-34843-z ]
- Protein c10 (42 kDa, Protein from Vaccinia virus Western Reserve)
- Vaccinia c16 protein bound to ku70/ku80 (230 kDa, Complex from Homo sapiens)
- X-ray repair cross-complementing protein 5 (85 kDa, Protein from Homo sapiens)
- X-ray repair cross-complementing protein 6 (74 kDa, Protein from Homo sapiens)
Vaccinia C16 protein bound to Ku70/Ku80
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 8ag5
Q-score: 0.532
Rivera-Calzada A, Arribas-Bosacoma R, Ruiz-Ramos A, Escudero-Bravo P, Boskovic J, Fernandez-Leiro R, Oliver AW, Pearl LH, Llorca O
Nat Commun (2022) 13 pp. 7062-7062 [ Pubmed: 36400800 DOI: doi:10.1038/s41467-022-34843-z ]
- Ku70-xrcc6 (74 kDa, Protein from Homo sapiens)
- Vaccinia c16 protein bound to ku70/ku80 (230 kDa, Complex from Homo sapiens)
- X-ray repair cross-complementing protein 5 (85 kDa, Protein from Homo sapiens)
- Protein c10 (42 kDa, Protein from Vaccinia virus Western Reserve)
Human endogenous retrovirus (HML2) mature capsid assembly, T=1 icosahedron
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 6ssj
Q-score: 0.557
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 6ssk
Q-score: 0.522
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
Human endogenous retrovirus (HML2) mature capsid assembly, D6 capsule
Resolution: 3.77 Å
EM Method: Single-particle
Fitted PDBs: 6ssl
Q-score: 0.414
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
Human endogenous retrovirus (HML2) mature capsid assembly, T=3 icosahedron
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 6ssm
Q-score: 0.321
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
cryoEM reconstruction of 3BC315 Fab in complex with BG505 SOSIP.664 Env trimer
Lee JH, Leaman DP, Kim AS, Torrents de la Pena A, Sliepen K, Yasmeen A, Derking R, Ramos A, de Taeye SW, Ozorowski G, Klein F, Burton DR, Nussenzweig MC, Poignard P, Moore JP, Klasse PJ, Sanders RW, Zwick MB, Wilson IA, Ward AB
Nat Commun (2015) 6 pp. 8167-8167 [ DOI: doi:10.1038/ncomms9167 Pubmed: 26404402 ]
- 3bc315 fab in complex with bg505 sosip.664 trimer (520 kDa, Sample)
- Hiv-1 envelope glycoprotein (420 kDa, Protein)
- 3bc315 antibody fab (500 kDa, Protein from Homo sapiens)