Vaccinia C16 N-terminal domains
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 8ag3
Q-score: 0.464
Rivera-Calzada A, Arribas-Bosacoma R, Ruiz-Ramos A, Escudero-Bravo P, Boskovic J, Fernandez-Leiro R, Oliver AW, Pearl LH, Llorca O
Nat Commun (2022) 13 pp. 7062-7062 [ Pubmed: 36400800 DOI: doi:10.1038/s41467-022-34843-z ]
- C16 n-terminal domains in the c16-ku70/ku80 complex (230 kDa, Complex from Vaccinia virus)
- Protein c10 (42 kDa, Protein from Vaccinia virus Western Reserve)
Vaccinia C16 protein bound to Ku70/Ku80
Resolution: 2.46 Å
EM Method: Single-particle
Fitted PDBs: 8ag4
Q-score: 0.551
Rivera-Calzada A, Arribas-Bosacoma R, Ruiz-Ramos A, Escudero-Bravo P, Boskovic J, Fernandez-Leiro R, Oliver AW, Pearl LH, Llorca O
Nat Commun (2022) 13 pp. 7062-7062 [ Pubmed: 36400800 DOI: doi:10.1038/s41467-022-34843-z ]
- Protein c10 (42 kDa, Protein from Vaccinia virus Western Reserve)
- Vaccinia c16 protein bound to ku70/ku80 (230 kDa, Complex from Homo sapiens)
- X-ray repair cross-complementing protein 5 (85 kDa, Protein from Homo sapiens)
- X-ray repair cross-complementing protein 6 (74 kDa, Protein from Homo sapiens)
Vaccinia C16 protein bound to Ku70/Ku80
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 8ag5
Q-score: 0.532
Rivera-Calzada A, Arribas-Bosacoma R, Ruiz-Ramos A, Escudero-Bravo P, Boskovic J, Fernandez-Leiro R, Oliver AW, Pearl LH, Llorca O
Nat Commun (2022) 13 pp. 7062-7062 [ Pubmed: 36400800 DOI: doi:10.1038/s41467-022-34843-z ]
- Ku70-xrcc6 (74 kDa, Protein from Homo sapiens)
- Vaccinia c16 protein bound to ku70/ku80 (230 kDa, Complex from Homo sapiens)
- X-ray repair cross-complementing protein 5 (85 kDa, Protein from Homo sapiens)
- Protein c10 (42 kDa, Protein from Vaccinia virus Western Reserve)
Human endogenous retrovirus (HML2) mature capsid assembly, T=1 icosahedron
Resolution: 2.75 Å
EM Method: Single-particle
Fitted PDBs: 6ssj
Q-score: 0.557
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
Human endogenous retrovirus (HML2) mature capsid assembly, D5 capsule
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 6ssk
Q-score: 0.522
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
Human endogenous retrovirus (HML2) mature capsid assembly, D6 capsule
Resolution: 3.77 Å
EM Method: Single-particle
Fitted PDBs: 6ssl
Q-score: 0.414
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
Human endogenous retrovirus (HML2) mature capsid assembly, T=3 icosahedron
Resolution: 4.34 Å
EM Method: Single-particle
Fitted PDBs: 6ssm
Q-score: 0.321
Acton O, Grant T, Nicastro G, Ball NJ, Goldstone DC, Robertson LE, Sader K, Nans A, Ramos A, Stoye JP, Taylor IA, Rosenthal PB
Nat Commun (2019) 10 pp. 5822-5822 [ Pubmed: 31862888 DOI: doi:10.1038/s41467-019-13786-y ]
Landais E, Murrell B, Briney B, Murrell S, Rantalainen K, Berndsen ZT, Ramos A, Wickramasinghe L, Smith ML, Eren K, de Val N, Wu M, Cappelletti A, Umotoy J, Lie Y, Wrin T, Algate P, Chan-Hui PY, Karita E, Ward AB, Wilson IA, Burton DR, Smith D, Pond SLK, Poignard P
Immunity (2017) 47 pp. 990-1003.e9 [ DOI: doi:10.1016/j.immuni.2017.11.002 Pubmed: 29166592 ]
- Immunoglobulin g pct64-13c light chain (Protein from Homo sapiens)
- Hiv-1 envelope glycoprotein sosip.664 clone pc64m4c054 (Protein from Human immunodeficiency virus 1)
- Immunoglobulin g pct64-13c heavy chain (Protein from Homo sapiens)
- Hiv-1 envelope glycoprotein sosip.664 clone pc64m4c054 in complex with autologous fab pct64-13c (275 kDa, Complex from Human immunodeficiency virus 1)
HIV-1 Envelope Glycoprotein clone PC64M4c054 SOSIP in complex with PGV04 Fab
Landais E, Murrell B, Briney B, Murrell S, Rantalainen K, Berndsen ZT, Ramos A, Wickramasinghe L, Smith ML, Eren K, de Val N, Wu M, Cappelletti A, Umotoy J, Lie Y, Wrin T, Algate P, Chan-Hui PY, Karita E, Ward AB, Wilson IA, Burton DR, Smith D, Pond SLK, Poignard P
Immunity (2017) 47 pp. 990-1003.e9 [ DOI: doi:10.1016/j.immuni.2017.11.002 Pubmed: 29166592 ]
HIV-1 Envelope Glycoprotein clone PC64M18c043 SOSIP.664
Landais E, Murrell B, Briney B, Murrell S, Rantalainen K, Berndsen ZT, Ramos A, Wickramasinghe L, Smith ML, Eren K, de Val N, Wu M, Cappelletti A, Umotoy J, Lie Y, Wrin T, Algate P, Chan-Hui PY, Karita E, Ward AB, Wilson IA, Burton DR, Smith D, Pond SLK, Poignard P
Immunity (2017) 47 pp. 990-1003.e9 [ DOI: doi:10.1016/j.immuni.2017.11.002 Pubmed: 29166592 ]
- Hiv-1 envelope glycoprotein clone pc64m18c043 sosip.664 (Protein from Human immunodeficiency virus 1)
- Human igg fab pgv04 light chain (Protein from Homo sapiens)
- Hiv-1 envelope glycoprotein clone pc64m18c043 sosip.664 in complex with pgv04 fab (225 kDa, Complex from Human immunodeficiency virus 1)
- Human igg fab pgv04 heavy chain (Protein from Homo sapiens)