Rat alpha5beta1 integrin, headpiece
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8oxz
Q-score: 0.293
Shafaq-Zadah M, Dransart E, Wunder C, Chambon V, Valades-Cruz CA, Leconte L, Sarangi NK, Robinson J, Bai S-K, Regmi R, Di Cicco A, Hovasse A, Bartels R, Nilsson UJ, Cianferani-Sanglier S, Leffler H, Keyes TE, Levy D, Raunser S, Roderer D, Johannes L
To Be Published
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Integrin beta-1 (88 kDa, Protein from Rattus norvegicus)
- Integrin subunit alpha 5 (119 kDa, Protein from Rattus norvegicus)
- Alpha5beta1 integrin from rattus norvegicus (Complex from Rattus norvegicus)
Rat alpha5beta1 integrin, leg piece
Shafaq-Zadah M, Dransart E, Wunder C, Chambon V, Valades-Cruz CA, Leconte L, Sarangi NK, Robinson J, Bai S-K, Regmi R, Di Cicco A, Hovasse A, Bartels R, Nilsson UJ, Cianferani-Sanglier S, Leffler H, Keyes TE, Levy D, Raunser S, Roderer D, Johannes L
To Be Published
Photorhabdus luminescens TcdA1 prepore-to-pore intermediate, K1179W mutant
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8cpz
Q-score: 0.526
Ng'ang'a PN, Folz J, Kucher S, Roderer D, Xu Y, Sitsel O, Belyy A, Prumbaum D, Kuhnemuth R, Assafa TE, Dong M, Seidel CAM, Bordignon E, Raunser S
Sci Adv (2025) 11 pp. eadr2019-eadr2019 [ DOI: doi:10.1126/sciadv.adr2019 Pubmed: 39752508 ]
- Tcda1 (1 MDa, Complex from Photorhabdus luminescens)
- Tcda1 (285 kDa, Protein from Photorhabdus luminescens)
Photorhabdus luminescens TcdA1 prepore-to-pore intermediate, K567W K2008W mutant
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8cq0
Q-score: 0.466
Ng'ang'a PN, Folz J, Kucher S, Roderer D, Xu Y, Sitsel O, Belyy A, Prumbaum D, Kuhnemuth R, Assafa TE, Dong M, Seidel CAM, Bordignon E, Raunser S
Sci Adv (2025) 11 pp. eadr2019-eadr2019 [ DOI: doi:10.1126/sciadv.adr2019 Pubmed: 39752508 ]
- Tcda1 (1 MDa, Complex from Photorhabdus luminescens)
- Tcda1 (285 kDa, Protein from Photorhabdus luminescens)
Photorhabdus luminescens TcdA1 prepore-to-pore intermediate, C16S, C20S, C870S, T1279C mutant
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8cq2
Q-score: 0.448
Ng'ang'a PN, Folz J, Kucher S, Roderer D, Xu Y, Sitsel O, Belyy A, Prumbaum D, Kuhnemuth R, Assafa TE, Dong M, Seidel CAM, Bordignon E, Raunser S
Sci Adv (2025) 11 pp. eadr2019-eadr2019 [ DOI: doi:10.1126/sciadv.adr2019 Pubmed: 39752508 ]
- Tcda1 (285 kDa, Protein from Photorhabdus luminescens)
- Tcda1 (1 MDa, Complex from Photorhabdus luminescens)
Structure of P. luminescens TccC3-F-actin complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7z7h
Q-score: 0.366
Belyy A, Lindemann F, Roderer D, Funk J, Bardiaux B, Protze J, Bieling P, Oschkinat H, Raunser S
Nat Commun (2022) 13 pp. 4202-4202 [ DOI: doi:10.1038/s41467-022-31836-w Pubmed: 35858890 ]
- Maltose/maltodextrin-binding periplasmic protein,tccc3 (63 kDa, Protein from Photorhabdus luminescens)
- Structure of p. luminescence tccc3-f-actin complex (Complex from Photorhabdus luminescens)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Nicotinamide (122 Da, Ligand)
- Actin, alpha skeletal muscle (42 kDa, Protein from rabbit)
- Adenosine-5-diphosphoribose (559 Da, Ligand)
Structure of ADP-ribosylated F-actin
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7z7i
Q-score: 0.444
Belyy A, Lindemann F, Roderer D, Funk J, Bardiaux B, Protze J, Bieling P, Oschkinat H, Raunser S
Nat Commun (2022) 13 pp. 4202-4202 [ DOI: doi:10.1038/s41467-022-31836-w Pubmed: 35858890 ]
- Magnesium ion (24 Da, Ligand)
- Structure of adp-ribosylated f-actin (Complex from Oryctolagus cuniculus)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Actin, alpha skeletal muscle (42 kDa, Protein from rabbit)
- Adenosine-5-diphosphoribose (559 Da, Ligand)
Photorhabdus luminescens TcdA1 in complex with BSA-Lewis X
Roderer D, Brocker F, Sitsel O, Kaplonek P, Leidreiter F, Seeberger PH, Raunser S
Nat Commun (2020) 11 pp. 2694-2694 [ Pubmed: 32483155 DOI: doi:10.1038/s41467-020-16536-7 ]
- Photorhabdus luminescens toxin complex subunit tcda1, homopentamer (Protein from Photorhabdus luminescens)
- Bsa with lewis x glycans crosslinked to surface lysines (Protein from Bos taurus)
- Photorhabdus luminescens toxin complex subunit tcda1, homopentamer (Complex from Photorhabdus luminescens)
- Photorhabdus luminescens tcda1 pentamer with one bsa-lewis x, crosslinked with glutaraldehyde (1 MDa, Complex)
- Bsa with lewis x glycans crosslinked to surface lysines (Complex from Bos taurus)
Morganella morganii TcdA4 in complex with porcine mucosa heparin
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 6yew
Q-score: 0.478
Roderer D, Brocker F, Sitsel O, Kaplonek P, Leidreiter F, Seeberger PH, Raunser S
Nat Commun (2020) 11 pp. 2694-2694 [ Pubmed: 32483155 DOI: doi:10.1038/s41467-020-16536-7 ]
Xenorhabdus nematophila XptA1 in complex with porcine mucosa heparin
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6yey
Q-score: 0.434
Roderer D, Brocker F, Sitsel O, Kaplonek P, Leidreiter F, Seeberger PH, Raunser S
Nat Commun (2020) 11 pp. 2694-2694 [ Pubmed: 32483155 DOI: doi:10.1038/s41467-020-16536-7 ]