SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-57
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8cxn
Q-score: 0.354
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Pan-sarbecovirus nanobody 2-57 (14 kDa, Protein from Lama glama)
- Sars-cov-2 spike protein with psnb 2-34 bound (Complex from Lama glama)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-22
Resolution: 2.3 Å
EM Method: Single-particle
Fitted PDBs: 8cxq
Q-score: 0.38
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Pan-sarbecovirus nanobody 1-22 (13 kDa, Protein from Lama glama)
- Sars-cov-2 spike protein with psnb 1-22 bound (Complex from Lama glama)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-65
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8cy6
Q-score: 0.336
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Pan-sarbecovirus nanobody 2-65 (12 kDa, Protein from Lama glama)
- Sars-cov-2 spike protein with psnb 2-65 bound (Complex from Lama glama)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-34
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8cy7
Q-score: 0.33
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Pan-sarbecovirus nanobody 2-38 (13 kDa, Protein from Lama glama)
- Sars-cov-2 spike protein with psnb 2-34 bound (Complex from Lama glama)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-23
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8cy9
Q-score: 0.336
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Pan-sarbecovirus nanobody 1-23 (12 kDa, Protein from Lama glama)
- Sars-cov-2 spike protein with psnb 1-23 bound (Complex from Lama glama)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-67
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8cya
Q-score: 0.352
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Pan-sarbecovirus nanobody 2-67 (14 kDa, Protein from Lama glama)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike protein with psnb 2-65 bound (Complex from Lama glama)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 1-8
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8cyb
Q-score: 0.353
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Pan-sarbecovirus nanobody 1-8 (14 kDa, Protein from Lama glama)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike protein with psnb 1-8 bound (Complex from Lama glama)
- 1-deoxy-alpha-d-mannopyranose (164 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-34
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8cyc
Q-score: 0.343
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Sars-cov-2 spike protein with psnb 2-34 bound (Complex from Lama glama)
- Pan-sarbecovirus nanobody 2-34 (14 kDa, Protein from Lama glama)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 Spike protein in complex with a pan-sarbecovirus nanobody 2-45
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 8cyd
Q-score: 0.362
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Sars-cov-2 spike protein with psnb 2-45 bound (Complex from Lama glama)
- Spike glycoprotein (125 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Pan-sarbecovirus nanobody 2-45 (12 kDa, Protein from Lama glama)
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8cyj
Q-score: 0.226
Xiang Y, Huang W, Liu H, Sang Z, Nambulli S, Tubiana J, Williams Jr KL, Duprex WP, Schneidman-Duhovny D, Wilson IA, Taylor DJ, Shi Y
Cell Rep (2022) 39 pp. 111004-111004 [ Pubmed: 35738279 DOI: doi:10.1016/j.celrep.2022.111004 ]
- Pan-sarbecovirus nanobody 2-10 (14 kDa, Protein from Lama glama)
- Pan-sarbecovirus nanobody 2-67 (14 kDa, Protein from Lama glama)
- Sars-cov-2 spike protein with psnbs 2-10, 2-67, 2-62 and 1-25 (Complex from Lama glama)
- Pan-sarbecovirus nanobody 1-25 (13 kDa, Protein from Lama glama)
- Pan-sarbecovirus nanobody 2-62 (13 kDa, Protein from Lama glama)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)