Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7ucg
Q-score: 0.411
Barnes CO, Schoofs T, Gnanapragasam PNP, Golijanin J, Huey-Tubman KE, Gruell H, Schommers P, Suh-Toma N, Lee YE, Cetrulo Lorenzi JC, Piechocka-Trocha A, Scheid JF, West Jr AP, Walker BD, Seaman MS, Klein F, Nussenzweig MC, Bjorkman PJ
Sci Adv (2022) 8 pp. eabp8155-eabp8155 [ DOI: doi:10.1126/sciadv.abp8155 Pubmed: 35960796 ]
- Envelope glycoprotein gp41 (17 kDa, Protein from Human immunodeficiency virus 1)
- Envelope glycoprotein gp160 (56 kDa, Protein from Human immunodeficiency virus 1)
- Bg24 light chain (21 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Complex of du422 sosip trimer bound to 10-1074 and bg24 fab fragments (650 kDa, Complex from Homo sapiens)
- 10-1074 fab heavy chain (26 kDa, Protein from Homo sapiens)
- Bg24 cdrh2-v2 fab heavy chain (25 kDa, Protein from Homo sapiens)
- 10-1074 light chain (23 kDa, Protein from Homo sapiens)
HIV-1 Env (BG505 SOSIP.664) in complex with the IgA bNAb 7-269 and the antibody 3BNC117.
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 7pc2
Q-score: -0.058
Lorin V, Fernandez I, Masse-Ranson G, Bouvin-Pley M, Molinos-Albert LM, Planchais C, Hieu T, Pehau-Arnaudet G, Hrebik D, Girelli-Zubani G, Fiquet O, Guivel-Benhassine F, Sanders RW, Walker BD, Schwartz O, Scheid JF, Dimitrov JD, Plevka P, Braibant M, Seaman MS, Bontems F, Di Santo JP, Rey FA, Mouquet H
J Exp Med (2022) 219 [ Pubmed: 35230385 DOI: doi:10.1084/jem.20212045 ]
- 3bnc117 igg fab light chain (23 kDa, Protein from Homo sapiens)
- Env protomer with one 3bnc117 fab and one 7-269 fab (Complex from Homo sapiens)
- 7-269 iga fab light chain (23 kDa, Protein from Homo sapiens)
- Ternary complex of hiv env (bg505 sosip.664) with bnabs 3bnc117 (igg fab) and 7269 (iga fab) (Complex from Homo sapiens)
- Gp120, bg505 sosip.664 t332n (54 kDa, Protein from Human immunodeficiency virus)
- 3bnc igg fab heavy chain (24 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Gp41 bg505 t332n sosip.664 (17 kDa, Protein from Human immunodeficiency virus)
- 7-269 iga fab heavy chain (26 kDa, Protein from Homo sapiens)
HIV-1 Env (BG505 SOSIP.664) in complex with the bNAb 7-176
Lorin V, Fernandez I, Masse-Ranson G, Bouvin-Pley M, Molinos-Albert LM, Planchais C, Hieu T, Pehau-Arnaudet G, Hrebik D, Girelli-Zubani G, Fiquet O, Guivel-Benhassine F, Sanders RW, Walker BD, Schwartz O, Scheid JF, Dimitrov JD, Plevka P, Braibant M, Seaman MS, Bontems F, Di Santo JP, Rey FA, Mouquet H
J Exp Med (2022) 219 [ DOI: doi:10.1084/jem.20212045 Pubmed: 35230385 ]
HIV-1 Env (BG505 SOSIP.664) in complex with the bNAb 7-155
Lorin V, Fernandez I, Masse-Ranson G, Bouvin-Pley M, Molinos-Albert LM, Planchais C, Hieu T, Pehau-Arnaudet G, Hrebik D, Girelli-Zubani G, Fiquet O, Guivel-Benhassine F, Sanders RW, Walker BD, Schwartz O, Scheid JF, Dimitrov JD, Plevka P, Braibant M, Seaman MS, Bontems F, Di Santo JP, Rey FA, Mouquet H
J Exp Med (2022) 219 [ DOI: doi:10.1084/jem.20212045 Pubmed: 35230385 ]
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7m6e
Q-score: 0.394
Scheid JF, Barnes CO, Eraslan B, Hudak A, Keeffe JR, Cosimi LA, Brown EM, Muecksch F, Weisblum Y, Zhang S, Delorey T, Woolley AE, Ghantous F, Park SM, Phillips D, Tusi B, Huey-Tubman KE, Cohen AA, Gnanapragasam PNP, Rzasa K, Hatziioanno T, Durney MA, Gu X, Tada T, Landau NR, West Jr AP, Rozenblatt-Rosen O, Seaman MS, Baden LR, Graham DB, Deguine J, Bieniasz PD, Regev A, Hung D, Bjorkman PJ, Xavier RJ
Cell (2021) 184 pp. 3205- [ Pubmed: 34015271 DOI: doi:10.1016/j.cell.2021.04.032 ]
- Ternary complex of bg10-19 fab bound to sars-cov-2 spike trimer (720 kDa, Complex)
- Bg10-19 fab (Complex from Homo sapiens)
- Bg10-19 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bg10-19 fab light chain (22 kDa, Protein from Homo sapiens)
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 7m6f
Q-score: 0.32
Scheid JF, Barnes CO, Eraslan B, Hudak A, Keeffe JR, Cosimi LA, Brown EM, Muecksch F, Weisblum Y, Zhang S, Delorey T, Woolley AE, Ghantous F, Park SM, Phillips D, Tusi B, Huey-Tubman KE, Cohen AA, Gnanapragasam PNP, Rzasa K, Hatziioanno T, Durney MA, Gu X, Tada T, Landau NR, West Jr AP, Rozenblatt-Rosen O, Seaman MS, Baden LR, Graham DB, Deguine J, Bieniasz PD, Regev A, Hung D, Bjorkman PJ, Xavier RJ
Cell (2021) 184 pp. 3205- [ Pubmed: 34015271 DOI: doi:10.1016/j.cell.2021.04.032 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Ternary complex of bg1-22 fab bound to sars-cov-2 spike trimer (720 kDa, Complex)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bg1-22 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Bg1-22 fab (Complex from Homo sapiens)
- Bg1-22 fab light chain (22 kDa, Protein from Homo sapiens)
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7m6g
Q-score: 0.317
Scheid JF, Barnes CO, Eraslan B, Hudak A, Keeffe JR, Cosimi LA, Brown EM, Muecksch F, Weisblum Y, Zhang S, Delorey T, Woolley AE, Ghantous F, Park SM, Phillips D, Tusi B, Huey-Tubman KE, Cohen AA, Gnanapragasam PNP, Rzasa K, Hatziioanno T, Durney MA, Gu X, Tada T, Landau NR, West Jr AP, Rozenblatt-Rosen O, Seaman MS, Baden LR, Graham DB, Deguine J, Bieniasz PD, Regev A, Hung D, Bjorkman PJ, Xavier RJ
Cell (2021) 184 pp. 3205- [ Pubmed: 34015271 DOI: doi:10.1016/j.cell.2021.04.032 ]
- Bg7-15 fab (Complex from Homo sapiens)
- Ternary complex of bg7-15 fab bound to sars-cov-2 spike trimer (720 kDa, Complex)
- Bg7-15 fab light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Bg7-15 fab heavy chain (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7m6h
Q-score: 0.254
Scheid JF, Barnes CO, Eraslan B, Hudak A, Keeffe JR, Cosimi LA, Brown EM, Muecksch F, Weisblum Y, Zhang S, Delorey T, Woolley AE, Ghantous F, Park SM, Phillips D, Tusi B, Huey-Tubman KE, Cohen AA, Gnanapragasam PNP, Rzasa K, Hatziioanno T, Durney MA, Gu X, Tada T, Landau NR, West Jr AP, Rozenblatt-Rosen O, Seaman MS, Baden LR, Graham DB, Deguine J, Bieniasz PD, Regev A, Hung D, Bjorkman PJ, Xavier RJ
Cell (2021) 184 pp. 3205- [ Pubmed: 34015271 DOI: doi:10.1016/j.cell.2021.04.032 ]
- Sars-cov-2 spike trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bg7-20 fab (Complex from Homo sapiens)
- Ternary complex of bg7-20 fab bound to sars-cov-2 spike trimer (720 kDa, Complex)
- Bg7-20 fab light chain (22 kDa, Protein from Homo sapiens)
- Bg7-20 fab heavy chain (24 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7m6i
Q-score: 0.277
Scheid JF, Barnes CO, Eraslan B, Hudak A, Keeffe JR, Cosimi LA, Brown EM, Muecksch F, Weisblum Y, Zhang S, Delorey T, Woolley AE, Ghantous F, Park SM, Phillips D, Tusi B, Huey-Tubman KE, Cohen AA, Gnanapragasam PNP, Rzasa K, Hatziioanno T, Durney MA, Gu X, Tada T, Landau NR, West Jr AP, Rozenblatt-Rosen O, Seaman MS, Baden LR, Graham DB, Deguine J, Bieniasz PD, Regev A, Hung D, Bjorkman PJ, Xavier RJ
Cell (2021) 184 pp. 3205- [ Pubmed: 34015271 DOI: doi:10.1016/j.cell.2021.04.032 ]
- Ternary complex of bg1-24 fab bound to sars-cov-2 spike trimer (720 kDa, Complex)
- Bg1-24 fab (Complex from Homo sapiens)
- Bg1-24 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Bg1-24 fab light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Sars-cov-2 spike trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (139 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
Negative stain reconstruction of 8ANC195 Fab in complex with BG505 SOSIP.664 trimer
Scharf L, Scheid JF, Lee JH, West AP, Chen C, Gao H, Gnanapragasam PN, Mares R, Seaman MS, Ward AB, Nussenzweig MC, Bjorkman PJ
Cell Rep (2014) 7 pp. 785-795 [ Pubmed: 24767986 DOI: doi:10.1016/j.celrep.2014.04.001 ]
- Fab 8anc195 (50 kDa, Protein from Homo sapiens)
- 8anc195 fab in complex with bg505 sosip.664 gp140 trimer (500 kDa, Sample)
- Soluble hiv-1 envelope glycoprotein (350 kDa, Protein)