Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 8f9m
Q-score: 0.346
Xie Z, Lin YC, Steichen JM, Ozorowski G, Kratochvil S, Ray R, Torres JL, Liguori A, Kalyuzhniy O, Wang X, Warner JE, Weldon SR, Dale GA, Kirsch KH, Nair U, Baboo S, Georgeson E, Adachi Y, Kubitz M, Jackson AM, Richey ST, Volk RM, Lee JH, Diedrich JK, Prum T, Falcone S, Himansu S, Carfi A, Yates 3rd JR, Paulson JC, Sok D, Ward AB, Schief WR, Batista FD
Science (2024) 384 pp. eadk0582-eadk0582 [ Pubmed: 38753770 DOI: doi:10.1126/science.adk0582 ]
- Bg505_md64_n332-gt5 gp41 (18 kDa, Protein from synthetic construct)
- Rm20a3 fab heavy chain (13 kDa, Protein from Macaca mulatta)
- Bg505_md64_n332-gt5 gp120 (54 kDa, Protein from synthetic construct)
- Rm20a3 fab light chain (13 kDa, Protein from Macaca mulatta)
- Hiv env germline targeting bg505_md64_n332-gt5 sosip in complex with v3-glycan polyclonal fab isolated from immunized wild type mice, and nhp monoclonal fab rm20a3 (Complex from Mus musculus)
- V3-glycan epitope polyclonal fab light chain (9 kDa, Protein from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- V3-glycan epitope polyclonal fab heavy chain (9 kDa, Protein from Mus musculus)
HIV-1 Envelope ApexGT2.2MUT in complex with PCT64.LMCA Fab
Resolution: 4.0 Å
EM Method: Single-particle
Fitted PDBs: 7t73
Q-score: 0.388
Willis JR, Berndsen ZT, Ma KM, Steichen JM, Schiffner T, Landais E, Liguori A, Kalyuzhniy O, Allen JD, Baboo S, Omorodion O, Diedrich JK, Hu X, Georgeson E, Phelps N, Eskandarzadeh S, Groschel B, Kubitz M, Adachi Y, Mullin TM, Alavi NB, Falcone S, Himansu S, Carfi A, Wilson IA, Yates 3rd JR, Paulson JC, Crispin M, Ward AB, Schief WR
Immunity (2022) 55 pp. 2149- [ Pubmed: 36179689 DOI: doi:10.1016/j.immuni.2022.09.001 ]
- Hiv envelope apexgt2.2mut gp41 (18 kDa, Protein from Human immunodeficiency virus 1)
- Pct64.lmca fab light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Pct64.lmca fab heavy chain (25 kDa, Protein from Homo sapiens)
- Hiv envelope apexgt2.2mut gp120 (56 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope apexgt2.2mut in complex with pct64.lmca fab (Complex from Human immunodeficiency virus 1)
HIV-1 Envelope ApexGT3 in complex with PG9.iGL Fab
Resolution: 4.43 Å
EM Method: Single-particle
Fitted PDBs: 7t76
Q-score: 0.324
Willis JR, Berndsen ZT, Ma KM, Steichen JM, Schiffner T, Landais E, Liguori A, Kalyuzhniy O, Allen JD, Baboo S, Omorodion O, Diedrich JK, Hu X, Georgeson E, Phelps N, Eskandarzadeh S, Groschel B, Kubitz M, Adachi Y, Mullin TM, Alavi NB, Falcone S, Himansu S, Carfi A, Wilson IA, Yates 3rd JR, Paulson JC, Crispin M, Ward AB, Schief WR
Immunity (2022) 55 pp. 2149- [ Pubmed: 36179689 DOI: doi:10.1016/j.immuni.2022.09.001 ]
- Pg9.igl fab heavy chain (28 kDa, Protein from Homo sapiens)
- Hiv envelope apexgt3 gp41 (18 kDa, Protein from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv envelope apexgt3 gp120 (56 kDa, Protein from Human immunodeficiency virus 1)
- Hiv-1 envelope apexgt3 in complex with pg9.igl fab (Complex from Human immunodeficiency virus 1)
- Pg9.igl fab light chain (28 kDa, Protein from Homo sapiens)
HIV-1 Envelope ApexGT3.N130 in complex with PG9 Fab
Resolution: 4.75 Å
EM Method: Single-particle
Fitted PDBs: 7t77
Q-score: 0.282
Willis JR, Berndsen ZT, Ma KM, Steichen JM, Schiffner T, Landais E, Liguori A, Kalyuzhniy O, Allen JD, Baboo S, Omorodion O, Diedrich JK, Hu X, Georgeson E, Phelps N, Eskandarzadeh S, Groschel B, Kubitz M, Adachi Y, Mullin TM, Alavi NB, Falcone S, Himansu S, Carfi A, Wilson IA, Yates 3rd JR, Paulson JC, Crispin M, Ward AB, Schief WR
Immunity (2022) 55 pp. 2149- [ Pubmed: 36179689 DOI: doi:10.1016/j.immuni.2022.09.001 ]
- Hiv envelope apexgt3.n130 gp41 (18 kDa, Protein from Human immunodeficiency virus 1)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hiv-1 envelope apexgt3.n130 in complex with pg9 fab (Complex from Human immunodeficiency virus 1)
- Pg9 fab heavy chain (27 kDa, Protein from Homo sapiens)
- Pg9 fab light chain (22 kDa, Protein from Homo sapiens)
- Hiv envelope apexgt3.n130 gp120 (56 kDa, Protein from Human immunodeficiency virus 1)