D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in intact conformation
Resolution: 3.96 Å
EM Method: Single-particle
Fitted PDBs: 8e92
Q-score: 0.397
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
D-cycloserine and glutamate bound Human GluN1a-GluN2C NMDA receptor in splayed conformation
Resolution: 3.71 Å
EM Method: Single-particle
Fitted PDBs: 8e93
Q-score: 0.443
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
PYD-106-bound Human GluN1a-GluN2C NMDA receptor in intact conformation
Resolution: 3.72 Å
EM Method: Single-particle
Fitted PDBs: 8e94
Q-score: 0.47
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- Methyl 4-[(2~{r})-3-ethanoyl-1-[2-(2-methyl-1~{h}-indol-3-yl)ethyl]-4-oxidanyl-5-oxidanylidene-2~{h}-pyrrol-2-yl]benzoate (432 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
Glycine and glutamate bound Human GluN1a-GluN2D NMDA receptor
Resolution: 3.38 Å
EM Method: Single-particle
Fitted PDBs: 8e96
Q-score: 0.411
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 1 (93 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 2d (96 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2d nmda receptors (Complex from Homo sapiens)
- Glutamic acid (147 Da, Ligand)
- Glycine (75 Da, Ligand)
PYD-106-bound Human GluN1a-GluN2C NMDA receptor in splayed conformation
Resolution: 4.19 Å
EM Method: Single-particle
Fitted PDBs: 8e97
Q-score: 0.336
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
Resolution: 3.75 Å
EM Method: Single-particle
Fitted PDBs: 8e98
Q-score: 0.38
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
Human GluN1a-GluN2A-GluN2C triheteromeric NMDA receptor in complex with Nb-4
Resolution: 4.24 Å
EM Method: Single-particle
Fitted PDBs: 8e99
Q-score: 0.363
Chou TH, Kang H, Simorowski N, Traynelis SF, Furukawa H
Mol Cell (2022) 82 pp. 4548- [ DOI: doi:10.1016/j.molcel.2022.10.008 Pubmed: 36309015 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Glutamate receptor ionotropic, nmda 2a (97 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 2c (96 kDa, Protein from Homo sapiens)
- Glutamate receptor ionotropic, nmda 1 (95 kDa, Protein from Homo sapiens)
- Hetero-tetrameric glun1a-glun2c nmda receptors (Complex from Homo sapiens)
- Nanobody 4 (16 kDa, Protein from Lama glama)
Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 class1
Resolution: 3.92 Å
EM Method: Single-particle
Fitted PDBs: 7te9
Q-score: 0.301
Tajima N, Simorowski N, Yovanno RA, Regan MC, Michalski K, Gomez R, Lau AY, Furukawa H
Nat Commun (2022) 13 pp. 923-923 [ Pubmed: 35177668 DOI: doi:10.1038/s41467-022-28559-3 ]
- Fab2 heavy chain (23 kDa, Protein from Mus musculus)
- Glutamate receptor ionotropic, nmda 1 (96 kDa, Protein from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 2b (92 kDa, Protein from Rattus norvegicus)
- Fab2 light chain (23 kDa, Protein from Mus musculus)
- Glun1b-2b nmdar - fab2 (Complex from Rattus norvegicus)
Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 non-active1-like
Resolution: 4.23 Å
EM Method: Single-particle
Fitted PDBs: 7teb
Q-score: 0.233
Tajima N, Simorowski N, Yovanno RA, Regan MC, Michalski K, Gomez R, Lau AY, Furukawa H
Nat Commun (2022) 13 pp. 923-923 [ Pubmed: 35177668 DOI: doi:10.1038/s41467-022-28559-3 ]
- Fab2 heavy chain (23 kDa, Protein from Mus musculus)
- Glutamate receptor ionotropic, nmda 1 (96 kDa, Protein from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 2b (98 kDa, Protein from Rattus norvegicus)
- Fab2 light chain (23 kDa, Protein from Mus musculus)
- Glun1b-2b nmdar - fab2 (Complex from Rattus norvegicus)
Cryo-EM structure of GluN1b-2B NMDAR complexed to Fab2 Non-active2-like
Resolution: 6.59 Å
EM Method: Single-particle
Fitted PDBs: 7tee
Q-score: 0.157
Tajima N, Simorowski N, Yovanno RA, Regan MC, Michalski K, Gomez R, Lau AY, Furukawa H
Nat Commun (2022) 13 pp. 923-923 [ Pubmed: 35177668 DOI: doi:10.1038/s41467-022-28559-3 ]
- Fab2 heavy chain (23 kDa, Protein from Mus musculus)
- Glutamate receptor ionotropic, nmda 1 (96 kDa, Protein from Rattus norvegicus)
- Glutamate receptor ionotropic, nmda 2b (98 kDa, Protein from Rattus norvegicus)
- Fab2 light chain (23 kDa, Protein from Mus musculus)
- Glun1b-2b nmdar - fab2 (Complex from Rattus norvegicus)