SARS-CoV-2 Omicron Spike trimer
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7wz1
Q-score: 0.343
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 dimer trimer )
Resolution: 4.47 Å
EM Method: Single-particle
Fitted PDBs: 7wo4
Q-score: 0.376
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab15 vl (23 kDa, Protein from Homo sapiens)
- Mab15 vh (24 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike in complex with IgG 553-15 (S-553-15 trimer)
Resolution: 3.45 Å
EM Method: Single-particle
Fitted PDBs: 7wo5
Q-score: 0.395
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab15 vl (23 kDa, Protein from Homo sapiens)
- Mab15 vh (24 kDa, Protein from Homo sapiens)
Locally refined region of SARS-CoV-2 Spike in complex with IgG 553-15
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7wo7
Q-score: 0.366
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab15 vl (23 kDa, Protein from Homo sapiens)
- Mab15 vh (24 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike in complex with IgG 553-60 (1-up trimer)
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 7woa
Q-score: 0.422
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Mab60 vh (24 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab60 vl (23 kDa, Protein from Homo sapiens)
SARS-CoV-2 Spike in complex with IgG 553-60 (2-up trimer)
Resolution: 3.25 Å
EM Method: Single-particle
Fitted PDBs: 7wob
Q-score: 0.417
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Mab60 vh (24 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab60 vl (23 kDa, Protein from Homo sapiens)
Locally refined region of SARS-CoV-2 Spike in complex with IgG 553-60
Resolution: 3.35 Å
EM Method: Single-particle
Fitted PDBs: 7woc
Q-score: 0.409
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike protein s1 (21 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Mab60 vh (24 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mab60 vl (23 kDa, Protein from Homo sapiens)
SARS-CoV-2 Omicron S monomer complexed with 553-49
Resolution: 4.06 Å
EM Method: Single-particle
Fitted PDBs: 7wog
Q-score: 0.17
Zhan W, Tian X, Zhang X, Xing S, Song W, Liu Q, Hao A, Hu Y, Zhang M, Ying T, Chen Z, Lan F, Sun L
J Virol (2022) 96 pp. e0048022-e0048022 [ DOI: doi:10.1128/jvi.00480-22 Pubmed: 35924918 ]
- Spike with mab15 (Complex from Severe acute respiratory syndrome coronavirus 2)
- 553-49 vl (23 kDa, Protein from Homo sapiens)
- Spike protein s1 (22 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 553-49 vh (24 kDa, Protein from Homo sapiens)
SARS-CoV-2 (D614G) Spike trimer
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 7wz2
Q-score: 0.456
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7vnc
Q-score: 0.387
Yang Z, Wang Y, Jin Y, Zhu Y, Wu Y, Li C, Kong Y, Song W, Tian X, Zhan W, Huang A, Zhou S, Xia S, Tian X, Peng C, Chen C, Shi Y, Hu G, Du S, Wang Y, Xie Y, Jiang S, Lu L, Sun L, Song Y, Ying T
Signal Transduct Target Ther (2021) 6 pp. 378-378 [ Pubmed: 34732694 DOI: doi:10.1038/s41392-021-00810-1 ]
- Spike glycoprotein (135 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Complex of sars-cov-2 spike with n3113 (525 MDa, Complex from Severe acute respiratory syndrome coronavirus 2)
- N3113 (12 kDa, Protein from Homo sapiens)