Resolution: 21.0 Å
EM Method: Single-particle
Fitted PDBs: 7t62
Q-score: 0.055
Li N, Torres MB, Spetz MR, Wang R, Peng L, Tian M, Dower CM, Nguyen R, Sun M, Tai CH, de Val N, Cachau R, Wu X, Hewitt SM, Kaplan RN, Khan J, St Croix B, Thiele CJ, Ho M
Cell Rep Med (2021) 2 pp. 100297-100297 [ DOI: doi:10.1016/j.xcrm.2021.100297 Pubmed: 34195677 ]
- Gpc2 het ct3 complex (Complex)
- Glypican-2 (61 kDa, Protein from Homo sapiens)
- Ct3 (47 kDa, Protein from Mus musculus)
Sun M, Azumaya CM, Tse E, Bulkley DP, Harrington MB, Gilbert G, Frost A, Southworth D, Verba KA, Cheng Y, Agard DA
J Struct Biol (2021) 213 [ Pubmed: 33984504 DOI: 10.1016/j.jsb.2021.107745 ]
Image sets:
- apoferritin multi-frame raw micrographs non gain normalized frames in LZW compressed TIFF format collected at 8 e/p/s in standard mode from Gatan K3
- apoferritin multi-frame raw micrographs non gain normalized frames in LZW compressed TIFF format collected at 16 e/p/s in CDS mode from Gatan K3 at lower magnification
- apoferritin multi-frame raw micrographs non gain normalized frames in LZW compressed TIFF format collected at 8 e/p/s in CDS mode from Gatan K3 at lower magnification
- apoferritin multi-frame raw micrographs non gain normalized frames in LZW compressed TIFF format collected at 8 e/p/s in CDS mode from Gatan K3
- apoferritin multi-frame raw micrographs non gain normalized frames in LZW compressed TIFF format collected at 16 e/p/s in standard mode from Gatan K3 at lower magnification
- apoferritin multi-frame raw micrographs non gain normalized frames in LZW compressed TIFF format collected at 8 e/p/s in standard mode from Gatan K3 at lower magnification
- apoferritin multi-frame raw micrographs non gain normalized frames in LZW compressed TIFF format collected at 4 e/p/s in CDS mode from Gatan K3
Tetrameric human mitochondrial Hsp90 (TRAP1) in the presence of AMP-PNP
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7klu
Q-score: 0.451
Liu YX, Agard DA, Elnatan D, Sun M, Larson AG
To Be Published
- Tetrameric human mitochondrial hsp90 (trap1) in the presence of amp-pnp (360 kDa, Complex from Homo sapiens)
- Heat shock protein 75 kda, mitochondrial, spycatcher (87 kDa, Protein from synthetic construct)
- Potassium ion (39 Da, Ligand)
- Heat shock protein 75 kda, mitochondrial, spytag, succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (chimera) (93 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7klv
Q-score: 0.528
Liu YX, Agard DA, Elnatan D, Sun M, Larson AG
To Be Published
- Heat shock protein 75 kda, mitochondrial, spycatcher (87 kDa, Protein from synthetic construct)
- Full-length human mitochondrial hsp90 (trap1) spycatcher/spytag-sdhb heterodimer in the presence of amp-pnp (180 kDa, Complex from Homo sapiens)
- Potassium ion (39 Da, Ligand)
- Heat shock protein 75 kda, mitochondrial, spytag, succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (chimera) (93 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Full-length human mitochondrial Hsp90 (TRAP1) with AMP-PNP
Resolution: 3.26 Å
EM Method: Single-particle
Fitted PDBs: 7kck
Q-score: 0.477
Liu YX, Agard DA, Elnatan D, Sun M, Myasnikov AG
To Be Published
- Magnesium ion (24 Da, Ligand)
- Heat shock protein 75 kda, mitochondrial (74 kDa, Protein from Homo sapiens)
- Potassium ion (39 Da, Ligand)
- Human trap1 dimer with amp-pnp (147 kDa, Complex from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
Full-length human mitochondrial Hsp90 (TRAP1) in complex with SdhB in the presence of AMP-PNP
Resolution: 3.14 Å
EM Method: Single-particle
Fitted PDBs: 7kcl
Q-score: 0.506
Liu YX, Agard DA, Elnatan D, Sun M, Myasnikov AG
To Be Published
- Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (15 kDa, Protein from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Human trap1 in complex with sdhb in the presence of amp-pnp (162 kDa, Complex from Homo sapiens)
- Potassium ion (39 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Heat shock protein 75 kda, mitochondrial (74 kDa, Protein from Homo sapiens)
Liu YX, Agard DA, Elnatan D, Sun M, Myasnikov AG
To Be Published
- Trap1 (Protein from Homo sapiens)
- Human trap1 in complex with sdhb in the presence of amp-pnp (162 kDa, Complex from Homo sapiens)
- Sdhb (Protein from Homo sapiens)
Human TRAP1 binding with SdhB folding intermediate state in the presence of AMP-PNP
Liu YX, Agard DA, Elnatan D, Sun M, Myasnikov AG
To Be Published
- Trap1 (Protein from Homo sapiens)
- Human trap1 in complex with sdhb in the presence of amp-pnp (162 kDa, Complex from Homo sapiens)
- Sdhb (Protein from Homo sapiens)
Full-length human mitochondrial Hsp90 (TRAP1) in complex with SdhB in the presence of AMP-PNP
Resolution: 3.43 Å
EM Method: Single-particle
Fitted PDBs: 7kcm
Q-score: 0.459
Liu YX, Agard DA, Elnatan D, Sun M, Myasnikov AG
To Be Published
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Human trap1 in complex with sdhb in the presence of amp-pnp (162 kDa, Complex from Homo sapiens)
- Potassium ion (39 Da, Ligand)
- Fe2/s2 (inorganic) cluster (175 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial (15 kDa, Protein from Homo sapiens)
- Heat shock protein 75 kda, mitochondrial (74 kDa, Protein from Homo sapiens)