D. melanogaster CMG-DNA with ATP, State 2B
Resolution: 4.46 Å
EM Method: Single-particle
Fitted PDBs: 6raz
Q-score: 0.246
Eickhoff P, Kose HB, Martino F, Petojevic T, Abid Ali F, Locke J, Tamberg N, Nans A, Berger JM, Botchan MR, Yardimci H, Costa A
Cell Rep (2019) 28 pp. 2673-2688.e8 [ DOI: doi:10.1016/j.celrep.2019.07.104 Pubmed: 31484077 ]
- Cmg helicase (Complex from Drosophila melanogaster)
- Ip07275p (23 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm5 (82 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna replication licensing factor mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Cmg helicase bound to forked dna in the presence of atp, state 2b (Complex)
- Dna replication complex gins protein sld5 (26 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm7 (81 kDa, Protein from Drosophila melanogaster)
- Probable dna replication complex gins protein psf2 (23 kDa, Protein from Drosophila melanogaster)
- At18545p (24 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm4 (96 kDa, Protein from Drosophila melanogaster)
- Dna (6 kDa, DNA from Drosophila melanogaster)
- Dna (573 Da, DNA from Drosophila melanogaster)
- Cdc45l (65 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dna replication licensing factor mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Dna (Complex from Drosophila melanogaster)
D. melanogaster CMG-DNA with ATP, State 1A
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 6raw
Q-score: 0.215
Eickhoff P, Kose HB, Martino F, Petojevic T, Abid Ali F, Locke J, Tamberg N, Nans A, Berger JM, Botchan MR, Yardimci H, Costa A
Cell Rep (2019) 28 pp. 2673-2688.e8 [ DOI: doi:10.1016/j.celrep.2019.07.104 Pubmed: 31484077 ]
- Cmg helicase (Complex from Drosophila melanogaster)
- Dna replication licensing factor mcm5 (82 kDa, Protein from Drosophila melanogaster)
- Ip07275p (23 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna replication licensing factor mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Dna replication complex gins protein sld5 (26 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Cmg helicase bound to forked dna in the presence of atp, state 1a (Complex)
- Dna replication licensing factor mcm7 (81 kDa, Protein from Drosophila melanogaster)
- Dna (7 kDa, DNA from Drosophila melanogaster)
- Probable dna replication complex gins protein psf2 (23 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm4 (96 kDa, Protein from Drosophila melanogaster)
- At18545p (24 kDa, Protein from Drosophila melanogaster)
- Dna (5'-d(p*tp*cp*gp*ap*tp*cp*gp*ap*tp*cp*gp*ap*t)-3') (3 kDa, DNA from Drosophila melanogaster)
- Cdc45l (65 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dna (Complex from Drosophila melanogaster)
D. melanogaster CMG-DNA with ATP, State 1B
Resolution: 3.99 Å
EM Method: Single-particle
Fitted PDBs: 6rax
Q-score: 0.255
Eickhoff P, Kose HB, Martino F, Petojevic T, Abid Ali F, Locke J, Tamberg N, Nans A, Berger JM, Botchan MR, Yardimci H, Costa A
Cell Rep (2019) 28 pp. 2673-2688.e8 [ DOI: doi:10.1016/j.celrep.2019.07.104 Pubmed: 31484077 ]
- Cmg helicase (Complex from Drosophila melanogaster)
- Dna replication licensing factor mcm5 (82 kDa, Protein from Drosophila melanogaster)
- Dna (6 kDa, DNA from Drosophila melanogaster)
- Ip07275p (23 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna (2 kDa, DNA from Drosophila melanogaster)
- Dna replication licensing factor mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Dna replication complex gins protein sld5 (26 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm7 (81 kDa, Protein from Drosophila melanogaster)
- At18545p (24 kDa, Protein from Drosophila melanogaster)
- Probable dna replication complex gins protein psf2 (23 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm4 (96 kDa, Protein from Drosophila melanogaster)
- Cmg helicase bound to forked dna in the presence of atp, state 1b (Complex)
- Cdc45l (65 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dna replication licensing factor mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Dna (Complex from Drosophila melanogaster)
D. melanogaster CMG-DNA with ATP, State 2A
Resolution: 4.28 Å
EM Method: Single-particle
Fitted PDBs: 6ray
Q-score: 0.235
Eickhoff P, Kose HB, Martino F, Petojevic T, Abid Ali F, Locke J, Tamberg N, Nans A, Berger JM, Botchan MR, Yardimci H, Costa A
Cell Rep (2019) 28 pp. 2673-2688.e8 [ DOI: doi:10.1016/j.celrep.2019.07.104 Pubmed: 31484077 ]
- Cmg helicase (Complex from Drosophila melanogaster)
- Dna replication licensing factor mcm5 (82 kDa, Protein from Drosophila melanogaster)
- Ip07275p (23 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Dna replication licensing factor mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Dna replication complex gins protein sld5 (26 kDa, Protein from Drosophila melanogaster)
- Dna (5'-d(p*ap*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (3 kDa, DNA from Drosophila melanogaster)
- Dna replication licensing factor mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm7 (81 kDa, Protein from Drosophila melanogaster)
- Cmg helicase bound to forked dna in the presence of atp, state 2a (Complex)
- Probable dna replication complex gins protein psf2 (23 kDa, Protein from Drosophila melanogaster)
- Dna replication licensing factor mcm4 (96 kDa, Protein from Drosophila melanogaster)
- At18545p (24 kDa, Protein from Drosophila melanogaster)
- Cdc45l (65 kDa, Protein from Drosophila melanogaster)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Dna replication licensing factor mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Dna (Complex from Drosophila melanogaster)
Drosophila melanogaster CMG complex bound to ADP.BeF3
Costa A, Ilves I, Tamberg N, Petojevic T, Nogales E, Botchan MR, Berger JM
Nat Struct Mol Biol (2011) 18 pp. 471-477 [ DOI: doi:10.1038/nsmb.2004 Pubmed: 21378962 ]
- Sld5 (26 kDa, Protein from Drosophila melanogaster)
- Mcm5 (82 kDa, Protein from Drosophila melanogaster)
- Psf3 (25 kDa, Protein from Drosophila melanogaster)
- Cdc45 (66 kDa, Protein from Drosophila melanogaster)
- Psf1 (23 kDa, Protein from Drosophila melanogaster)
- Mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Mcm7 (81 kDa, Protein from Drosophila melanogaster)
- Drosophila melanogaster cmg complex bound to adp.bef3 (700 kDa, Sample)
- Psf2 (23 kDa, Protein from Drosophila melanogaster)
- Mcm4 (97 kDa, Protein from Drosophila melanogaster)
Drosophila melanogaster CMG complex - APO
Costa A, Ilves I, Tamberg N, Petojevic T, Nogales E, Botchan MR, Berger JM
Nat Struct Mol Biol (2011) 18 pp. 471-477 [ DOI: doi:10.1038/nsmb.2004 Pubmed: 21378962 ]
- Mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Cdc45 (66 kDa, Protein from Drosophila melanogaster)
- Mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Mcm7 (81 kDa, Protein from Drosophila melanogaster)
- Sld5 (26 kDa, Protein from Drosophila melanogaster)
- Psf1 (23 kDa, Protein from Drosophila melanogaster)
- Mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Psf2 (23 kDa, Protein from Drosophila melanogaster)
- Psf3 (25 kDa, Protein from Drosophila melanogaster)
- Mcm4 (97 kDa, Protein from Drosophila melanogaster)
- Mcm5 (82 kDa, Protein from Drosophila melanogaster)
- Drosophila melanogaster cmg complex - apo (700 kDa, Sample)
Planar configuration of the Drosophila melanogaster Mcm2-7 complex
Costa A, Ilves I, Tamberg N, Petojevic T, Nogales E, Botchan MR, Berger JM
Nat Struct Mol Biol (2011) 18 pp. 471-477 [ DOI: doi:10.1038/nsmb.2004 Pubmed: 21378962 ]
- Mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Mcm7 (81 kDa, Protein from Drosophila melanogaster)
- Mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Mcm2-7 (540 kDa, Sample)
- Mcm4 (97 kDa, Protein from Drosophila melanogaster)
- Mcm5 (82 kDa, Protein from Drosophila melanogaster)
The lockwasher state of the Drosophila melanogaster Mcm2-7 complex
Costa A, Ilves I, Tamberg N, Petojevic T, Nogales E, Botchan MR, Berger JM
Nat Struct Mol Biol (2011) 18 pp. 471-477 [ DOI: doi:10.1038/nsmb.2004 Pubmed: 21378962 ]
- Mcm6 (92 kDa, Protein from Drosophila melanogaster)
- Mcm7 (81 kDa, Protein from Drosophila melanogaster)
- Mcm3 (91 kDa, Protein from Drosophila melanogaster)
- Mcm2 (100 kDa, Protein from Drosophila melanogaster)
- Mcm2-7 (540 kDa, Sample)
- Mcm4 (97 kDa, Protein from Drosophila melanogaster)
- Mcm5 (82 kDa, Protein from Drosophila melanogaster)