Nipah virus polymerase complex
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8zpv
Q-score: 0.357
Wang Y, Zhao L, Zhang Y, Wang Y, Tang J, Liu S, Gao H, Zhang X, Zinzula L, Kornberg RD, Zhang H
Sci Adv (2024) 10 pp. eadr7116-eadr7116 [ DOI: doi:10.1126/sciadv.adr7116 Pubmed: 39661676 ]
- Phosphoprotein (78 kDa, Protein from Henipavirus nipahense)
- Rna-directed rna polymerase l (257 kDa, Protein from Henipavirus nipahense)
- Zinc ion (65 Da, Ligand)
- L-p (Complex from Henipavirus nipahense)
Resolution: 3.7 Å
EM Method: Helical reconstruction
Fitted PDBs: 8s5h
Q-score: 0.408
McCorvie TJ, Adamoski D, Machado RAC, Tang J, Bailey HJ, Ferreira DSM, Strain-Damerell C, Basle A, Ambrosio ALB, Dias SMG, Yue WW
Nat Commun (2024) 15 pp. 2931-2931 [ Pubmed: 38575566 DOI: doi:10.1038/s41467-024-46864-x ]
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 8s5i
Q-score: 0.396
McCorvie TJ, Adamoski D, Machado RAC, Tang J, Bailey HJ, Ferreira DSM, Strain-Damerell C, Basle A, Ambrosio ALB, Dias SMG, Yue WW
Nat Commun (2024) 15 pp. 2931-2931 [ Pubmed: 38575566 DOI: doi:10.1038/s41467-024-46864-x ]
Full-length human cystathionine beta-synthase, basal state, helical reconstruction
Resolution: 3.9 Å
EM Method: Helical reconstruction
Fitted PDBs: 8s5j
Q-score: 0.434
McCorvie TJ, Adamoski D, Machado RAC, Tang J, Bailey HJ, Ferreira DSM, Strain-Damerell C, Basle A, Ambrosio ALB, Dias SMG, Yue WW
Nat Commun (2024) 15 pp. 2931-2931 [ Pubmed: 38575566 DOI: doi:10.1038/s41467-024-46864-x ]
Full-length human cystathionine beta-synthase, basal state, single particle reconstruction
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8s5k
Q-score: 0.341
McCorvie TJ, Adamoski D, Machado RAC, Tang J, Bailey HJ, Ferreira DSM, Strain-Damerell C, Basle A, Ambrosio ALB, Dias SMG, Yue WW
Nat Commun (2024) 15 pp. 2931-2931 [ Pubmed: 38575566 DOI: doi:10.1038/s41467-024-46864-x ]
Full-length human cystathionine beta-synthase, basal state, partially degraded tetramer
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8s5l
Q-score: 0.454
McCorvie TJ, Adamoski D, Machado RAC, Tang J, Bailey HJ, Ferreira DSM, Strain-Damerell C, Basle A, Ambrosio ALB, Dias SMG, Yue WW
Nat Commun (2024) 15 pp. 2931-2931 [ Pubmed: 38575566 DOI: doi:10.1038/s41467-024-46864-x ]
- Cystathionine beta-synthase (60 kDa, Protein from Homo sapiens)
- Helical assembly of full-length human cystathionine beta-synthase in the basal state (Complex from Homo sapiens)
- Pyridoxal-5'-phosphate (247 Da, Ligand)
- Cystathionine beta-synthase (60 kDa, Protein from Homo sapiens)
- Protoporphyrin ix containing fe (616 Da, Ligand)
Resolution: 4.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 8s5m
Q-score: 0.222
McCorvie TJ, Adamoski D, Machado RAC, Tang J, Bailey HJ, Ferreira DSM, Strain-Damerell C, Basle A, Ambrosio ALB, Dias SMG, Yue WW
Nat Commun (2024) 15 pp. 2931-2931 [ Pubmed: 38575566 DOI: doi:10.1038/s41467-024-46864-x ]
Omicron BA.4/5 SARS-CoV-2 S in complex with TH027 Fab
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7yve
Q-score: 0.47
Guo Y, Zhang G, Yang Q, Xie X, Lu Y, Cheng X, Wang H, Liang J, Tang J, Gao Y, Shang H, Dai J, Shi Y, Zhou J, Zhou J, Guo H, Yang H, Qi J, Liu L, Ma S, Zhang B, Huo Q, Xie Y, Wu J, Dong F, Zhang S, Lou Z, Gao Y, Song Z, Wang W, Sun Z, Yang X, Xiong D, Liu F, Chen X, Zhu P, Wang X, Cheng T, Rao Z
Nat Commun (2023) 14 pp. 3537-3537 [ Pubmed: 37322000 DOI: doi:10.1038/s41467-023-39267-x ]
- Th027 fab (Complex from Homo sapiens)
- Th027 fab light chain (11 kDa, Protein from Homo sapiens)
- Omicron ba.4/5 sars-cov-2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Omicron ba.5 sars-cov-2 s in complex with th027 fab (Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Th027 fab heavy chain (13 kDa, Protein from Homo sapiens)
Omicron BA.4/5 SARS-CoV-2 S RBD in complex with TH027 Fab
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7yvf
Q-score: 0.518
Guo Y, Zhang G, Yang Q, Xie X, Lu Y, Cheng X, Wang H, Liang J, Tang J, Gao Y, Shang H, Dai J, Shi Y, Zhou J, Zhou J, Guo H, Yang H, Qi J, Liu L, Ma S, Zhang B, Huo Q, Xie Y, Wu J, Dong F, Zhang S, Lou Z, Gao Y, Song Z, Wang W, Sun Z, Yang X, Xiong D, Liu F, Chen X, Zhu P, Wang X, Cheng T, Rao Z
Nat Commun (2023) 14 pp. 3537-3537 [ Pubmed: 37322000 DOI: doi:10.1038/s41467-023-39267-x ]
- Omicron ba.5 sars-cov-2 s rbd in complex with th027 fab (Complex)
- Th027 fab (Complex from Homo sapiens)
- Th027 fab light chain (11 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Th027 fab heavy chain (13 kDa, Protein from Homo sapiens)
- Omicron ba.4/5 sars-cov-2 s (Complex from Severe acute respiratory syndrome coronavirus 2)
Omicron BA.4/5 SARS-CoV-2 S in complex with TH132 Fab
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 7yvg
Q-score: 0.384
Guo Y, Zhang G, Yang Q, Xie X, Lu Y, Cheng X, Wang H, Liang J, Tang J, Gao Y, Shang H, Dai J, Shi Y, Zhou J, Zhou J, Guo H, Yang H, Qi J, Liu L, Ma S, Zhang B, Huo Q, Xie Y, Wu J, Dong F, Zhang S, Lou Z, Gao Y, Song Z, Wang W, Sun Z, Yang X, Xiong D, Liu F, Chen X, Zhu P, Wang X, Cheng T, Rao Z
Nat Commun (2023) 14 pp. 3537-3537 [ Pubmed: 37322000 DOI: doi:10.1038/s41467-023-39267-x ]
- Th132 fab light chain (11 kDa, Protein from Homo sapiens)
- Th027 fab (Complex from Homo sapiens)
- Th132 fab heavy chain (12 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Omicron ba.4/5 sars-cov-2 s (Complex from Severe acute respiratory syndrome coronavirus 2)
- Omicron ba.4/5 sars-cov-2 s in complex with th027 fab (Complex)