Cryo-EM structure of the D87G lysozyme amyloid fibril
Resolution: 2.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 8r4a
Q-score: 0.599
Karimi-Farsijani S, Sharma K, Ugrina M, Kuhn L, Pfeiffer PB, Haupt C, Wiese S, Hegenbart U, Schonland SO, Schwierz N, Schmidt M, Fandrich M
Nat Commun (2024) 15 pp. 9648-9648 [ DOI: doi:10.1038/s41467-024-54091-7 Pubmed: 39511224 ]
- Lysozyme c (14 kDa, Protein from Homo sapiens)
- Lysd87g amyloid fibril (Complex from Homo sapiens)
Ex vivo murine AApoAII amyloid fibril
Andreotti G, Baur J, Ugrina M, Pfeiffer PB, Hartmann M, Wiese S, Miyahara H, Higuchi K, Schwierz N, Schmidt M, Fändrich M
J Mol Biol (2024) 436 [ Pubmed: 38199491 DOI: 10.1016/j.jmb.2024.168441 ]
Image sets:
Unseeded Aβ(1-40) amyloid fibrils
Seeded Aβ(1-40) amyloid fibril
AApoAII amyloid fibril Morphology II (ex vivo)
Resolution: 2.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 8oq4
Q-score: 0.56
Andreotti G, Baur J, Ugrina M, Pfeiffer PB, Hartmann M, Wiese S, Miyahara H, Higuchi K, Schwierz N, Schmidt M, Fandrich M
J Mol Biol (2024) 436 pp. 168441-168441 [ Pubmed: 38199491 DOI: doi:10.1016/j.jmb.2024.168441 ]
- Aapoaii amyloid fibril (Complex from Mus musculus)
- Apolipoprotein a-ii (8 kDa, Protein from Mus musculus)
AApoAII amyloid fibril Morphology I (ex vivo)
Resolution: 2.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 8oq5
Q-score: 0.578
Andreotti G, Baur J, Ugrina M, Pfeiffer PB, Hartmann M, Wiese S, Miyahara H, Higuchi K, Schwierz N, Schmidt M, Fandrich M
J Mol Biol (2024) 436 pp. 168441-168441 [ Pubmed: 38199491 DOI: doi:10.1016/j.jmb.2024.168441 ]
- Aapoaii amyloid fibril (Complex from Mus musculus)
- Apolipoprotein a-ii (8 kDa, Protein from Mus musculus)
unseeded Abeta(1-40) amyloid fibril (morphology i)
Resolution: 2.59 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ot1
Q-score: 0.51
Pfeiffer PB, Ugrina M, Schwierz N, Sigurdson CJ, Schmidt M, Fandrich M
J Mol Biol (2023) 436 pp. 168422-168422 [ DOI: doi:10.1016/j.jmb.2023.168422 Pubmed: 38158175 ]
- In vitro abeta(1-40) amyloid fibril (Complex from Homo sapiens)
- Amyloid-beta a4 protein (4 kDa, Protein from Homo sapiens)
unseeded Abeta(1-40) amyloid fibril (morphology ii)
Resolution: 2.73 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ot3
Q-score: 0.554
Pfeiffer PB, Ugrina M, Schwierz N, Sigurdson CJ, Schmidt M, Fandrich M
J Mol Biol (2023) 436 pp. 168422-168422 [ DOI: doi:10.1016/j.jmb.2023.168422 Pubmed: 38158175 ]
- In vitro abeta(1-40) amyloid fibril (Complex from Homo sapiens)
- Amyloid-beta a4 protein (4 kDa, Protein from Homo sapiens)
seeded Abeta(1-40) amyloid fibril (morphology I)
Resolution: 2.97 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ot4
Q-score: 0.493
Pfeiffer PB, Ugrina M, Schwierz N, Sigurdson CJ, Schmidt M, Fandrich M
J Mol Biol (2023) 436 pp. 168422-168422 [ DOI: doi:10.1016/j.jmb.2023.168422 Pubmed: 38158175 ]
- Seeded in vitro abeta(1-40) amyloid fibril (Complex from Homo sapiens)
- Amyloid-beta a4 protein (4 kDa, Protein from Homo sapiens)