Cryo-EM structure of the D87G lysozyme amyloid fibril
Resolution: 2.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 8r4a
Q-score: 0.599
Karimi-Farsijani S, Sharma K, Ugrina M, Kuhn L, Pfeiffer PB, Haupt C, Wiese S, Hegenbart U, Schonland SO, Schwierz N, Schmidt M, Fandrich M
Nat Commun (2024) 15 pp. 9648-9648 [ DOI: doi:10.1038/s41467-024-54091-7 Pubmed: 39511224 ]
- Lysozyme c (14 kDa, Protein from Homo sapiens)
- Lysd87g amyloid fibril (Complex from Homo sapiens)
AApoAII amyloid fibril Morphology II (ex vivo)
Resolution: 2.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 8oq4
Q-score: 0.56
Andreotti G, Baur J, Ugrina M, Pfeiffer PB, Hartmann M, Wiese S, Miyahara H, Higuchi K, Schwierz N, Schmidt M, Fandrich M
J Mol Biol (2024) 436 pp. 168441-168441 [ Pubmed: 38199491 DOI: doi:10.1016/j.jmb.2024.168441 ]
- Aapoaii amyloid fibril (Complex from Mus musculus)
- Apolipoprotein a-ii (8 kDa, Protein from Mus musculus)
AApoAII amyloid fibril Morphology I (ex vivo)
Resolution: 2.4 Å
EM Method: Helical reconstruction
Fitted PDBs: 8oq5
Q-score: 0.578
Andreotti G, Baur J, Ugrina M, Pfeiffer PB, Hartmann M, Wiese S, Miyahara H, Higuchi K, Schwierz N, Schmidt M, Fandrich M
J Mol Biol (2024) 436 pp. 168441-168441 [ Pubmed: 38199491 DOI: doi:10.1016/j.jmb.2024.168441 ]
- Aapoaii amyloid fibril (Complex from Mus musculus)
- Apolipoprotein a-ii (8 kDa, Protein from Mus musculus)
unseeded Abeta(1-40) amyloid fibril (morphology i)
Resolution: 2.59 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ot1
Q-score: 0.51
Pfeiffer PB, Ugrina M, Schwierz N, Sigurdson CJ, Schmidt M, Fandrich M
J Mol Biol (2023) 436 pp. 168422-168422 [ DOI: doi:10.1016/j.jmb.2023.168422 Pubmed: 38158175 ]
- In vitro abeta(1-40) amyloid fibril (Complex from Homo sapiens)
- Amyloid-beta a4 protein (4 kDa, Protein from Homo sapiens)
unseeded Abeta(1-40) amyloid fibril (morphology ii)
Resolution: 2.73 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ot3
Q-score: 0.554
Pfeiffer PB, Ugrina M, Schwierz N, Sigurdson CJ, Schmidt M, Fandrich M
J Mol Biol (2023) 436 pp. 168422-168422 [ DOI: doi:10.1016/j.jmb.2023.168422 Pubmed: 38158175 ]
- In vitro abeta(1-40) amyloid fibril (Complex from Homo sapiens)
- Amyloid-beta a4 protein (4 kDa, Protein from Homo sapiens)
seeded Abeta(1-40) amyloid fibril (morphology I)
Resolution: 2.97 Å
EM Method: Helical reconstruction
Fitted PDBs: 8ot4
Q-score: 0.493
Pfeiffer PB, Ugrina M, Schwierz N, Sigurdson CJ, Schmidt M, Fandrich M
J Mol Biol (2023) 436 pp. 168422-168422 [ DOI: doi:10.1016/j.jmb.2023.168422 Pubmed: 38158175 ]
- Seeded in vitro abeta(1-40) amyloid fibril (Complex from Homo sapiens)
- Amyloid-beta a4 protein (4 kDa, Protein from Homo sapiens)