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EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Research:

perform basic research in molecular biology

Services:

offer vital services to scientists in the member states

Training

scientists, students and visitors at all levels

Transfer

and development of technology

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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primary_citation_author:"Velez B"

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Showing 1 - 6 of 6. Page 1 of 1

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EMD-41963

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Preholo-Proteasome from Beta 3 D205 deletion

Release date: April 17, 2024
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8u6y
Q-score: 0.513

Velez B, Walsh Jr RM, Rawson S, Razi A, Adams L, Perez EF, Jiao F, Blickling M, Rajakumar T, Fung D, Huang L, Hanna J

Nat Struct Mol Biol (2024) 31 pp. 1167-1175 [ Pubmed: 38600323 DOI: doi:10.1038/s41594-024-01262-1 ]

Sample:

Preholo-proteasome from beta 3 d205 deletion mutant (750 kDa, Complex from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-3 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome chaperone 1 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome maturation factor ump1 (16 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome assembly chaperone 2 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae S288C)

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EMD-41993

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Proteasome 20S Core Particle from Beta 3 D205 deletion

Release date: April 17, 2024
Resolution: 2.16 Å
EM Method: Single-particle
Fitted PDBs: 8u7u
Q-score: 0.688

Velez B, Walsh Jr RM, Rawson S, Razi A, Adams L, Perez EF, Jiao F, Blickling M, Rajakumar T, Fung D, Huang L, Hanna J

Nat Struct Mol Biol (2024) 31 pp. 1167-1175 [ Pubmed: 38600323 DOI: doi:10.1038/s41594-024-01262-1 ]

Sample:

Proteasome 20s core particle from beta 3 d205 deletion mutant (700 kDa, Complex from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-3 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae S288C)

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EMD-40938

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Preholo-Proteasome from Pre1-1 Pre4-1 Double Mutant

Release date: Sept. 6, 2023
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8t08
Q-score: 0.504

Walsh Jr RM, Rawson S, Schnell HM, Velez B, Rajakumar T, Hanna J

Nat Struct Mol Biol (2023) 30 pp. 1516-1524 [ DOI: doi:10.1038/s41594-023-01081-w Pubmed: 37653242 ]

Sample:

Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome chaperone 1 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-7 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae S288C)
Preholo-proteasome from pre1-1 pre4-1 double mutant (918 kDa, Complex from Saccharomyces cerevisiae)
Proteasome subunit alpha type-3 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome maturation factor ump1 (16 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome assembly chaperone 2 (30 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae S288C)

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EMD-40944

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Proteasome 20S core particle from Pre1-1 Pre4-1 Double mutant

Release date: Sept. 6, 2023
Resolution: 2.4 Å
EM Method: Single-particle
Fitted PDBs: 8t0m
Q-score: 0.66

Walsh Jr RM, Rawson S, Schnell HM, Velez B, Rajakumar T, Hanna J

Nat Struct Mol Biol (2023) 30 pp. 1516-1524 [ DOI: doi:10.1038/s41594-023-01081-w Pubmed: 37653242 ]

Sample:

Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-7 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-3 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome 20s core particle from pre1-1 pre4-1 double mutant (750 kDa, Complex from Saccharomyces cerevisiae)
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae S288C)

[Show more]

EMD-25847

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Cryo-EM structure of the 20S Alpha 3 Deletion proteasome core particle

Release date: Aug. 10, 2022
Resolution: 2.74 Å
EM Method: Single-particle
Fitted PDBs: 7tej
Q-score: 0.573

Rawson S, Walsh Jr RM, Velez B, Schnell HM, Jiao F, Blickling M, Ang J, Bhanu MK, Huang L, Hanna J

Nat Struct Mol Biol (2022) 29 pp. 791-800 [ DOI: doi:10.1038/s41594-022-00808-5 Pubmed: 35927584 ]

Sample:

Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
20s proteasome from alpha3delta proteasome mutant (700 kDa, Complex from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae S288C)

[Show more]

EMD-25848

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Cryo-EM structure of the 20S Alpha 3 Deletion proteasome core particle in complex with FUB1

Release date: Aug. 10, 2022
Resolution: 2.97 Å
EM Method: Single-particle
Fitted PDBs: 7teo
Q-score: 0.532

Rawson S, Walsh Jr RM, Velez B, Schnell HM, Jiao F, Blickling M, Ang J, Bhanu MK, Huang L, Hanna J

Nat Struct Mol Biol (2022) 29 pp. 791-800 [ DOI: doi:10.1038/s41594-022-00808-5 Pubmed: 35927584 ]

Sample:

Silencing boundary-establishment protein fub1 (26 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-2 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-4 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-5 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-2 (27 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-3 (22 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-5 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
20s proteasome from alpha3delta proteasome mutant in complex with silencing boundary-establishment protein fub1 (727 kDa, Complex from Saccharomyces cerevisiae)
Proteasome subunit beta type-6 (26 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-4 (28 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-6 (25 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-1 (23 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit beta type-7 (29 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-7 (31 kDa, Protein from Saccharomyces cerevisiae S288C)
Proteasome subunit alpha type-1 (28 kDa, Protein from Saccharomyces cerevisiae S288C)

[Show more]

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Showing 1 - 6 of 6. Page 1 of 1

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EMDB [6]

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