Resolution: 2.19 Å
EM Method: Single-particle
Fitted PDBs: 7utd
Q-score: 0.496
Grinter R, Kropp A, Venugopal H, Senger M, Badley J, Cabotaje PR, Jia R, Duan Z, Huang P, Stripp ST, Barlow CK, Belousoff M, Shafaat HS, Cook GM, Schittenhelm RB, Vincent KA, Khalid S, Berggren G, Greening C
Nature (2023) 615 pp. 541-547 [ DOI: doi:10.1038/s41586-023-05781-7 Pubmed: 36890228 ]
- Complex of the type 2 [nife]-hydrogenase huc from mycobacterium smegmatis (833 kDa, Complex from Mycolicibacterium smegmatis)
- Magnesium ion (24 Da, Ligand)
- Type 2 [nife]-hydrogenase huc membrane adapter subunit (6 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Menaquinone-9 (785 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Carbonmonoxide-(dicyano) iron (135 Da, Ligand)
- Hydrogenase-2, large subunit (57 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Hydrogenase-2, small subunit (39 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Nickel (iii) ion (58 Da, Ligand)
Resolution: 1.67 Å
EM Method: Single-particle
Fitted PDBs: 7uur
Q-score: 0.837
Grinter R, Kropp A, Venugopal H, Senger M, Badley J, Cabotaje PR, Jia R, Duan Z, Huang P, Stripp ST, Barlow CK, Belousoff M, Shafaat HS, Cook GM, Schittenhelm RB, Vincent KA, Khalid S, Berggren G, Greening C
Nature (2023) 615 pp. 541-547 [ DOI: doi:10.1038/s41586-023-05781-7 Pubmed: 36890228 ]
- Complex of the type 2 [nife]-hydrogenase huc from mycobacterium smegmatis (833 kDa, Complex from Mycolicibacterium smegmatis)
- Hydrogenase-2, small subunit (35 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Magnesium ion (24 Da, Ligand)
- Water (18 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Hydroxide ion (17 Da, Ligand)
- Carbonmonoxide-(dicyano) iron (135 Da, Ligand)
- Menadione (172 Da, Ligand)
- Hydrogenase-2, large subunit (57 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Nickel (iii) ion (58 Da, Ligand)
Resolution: 8.0 Å
EM Method: Single-particle
Fitted PDBs: 7uus
Q-score: 0.104
Grinter R, Kropp A, Venugopal H, Senger M, Badley J, Cabotaje PR, Jia R, Duan Z, Huang P, Stripp ST, Barlow CK, Belousoff M, Shafaat HS, Cook GM, Schittenhelm RB, Vincent KA, Khalid S, Berggren G, Greening C
Nature (2023) 615 pp. 541-547 [ DOI: doi:10.1038/s41586-023-05781-7 Pubmed: 36890228 ]
- [nife]-hydrogenase huc membrane associated subunit (19 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Magnesium ion (24 Da, Ligand)
- Menaquinone-9 (785 Da, Ligand)
- Hydrogenase-2, large subunit (57 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Fe3-s4 cluster (295 Da, Ligand)
- Carbonmonoxide-(dicyano) iron (135 Da, Ligand)
- Complex of the type 2 [nife]-hydrogenase huc from mycobacterium smegmatis (833 kDa, Complex from Mycolicibacterium smegmatis MC2 155)
- Hydrogenase-2, small subunit (39 kDa, Protein from Mycolicibacterium smegmatis MC2 155)
- Nickel (iii) ion (58 Da, Ligand)
Resolution: 1.52 Å
EM Method: Single-particle
Fitted PDBs: 8dqv
Q-score: 0.857
Grinter R, Kropp A, Venugopal H, Senger M, Badley J, Cabotaje PR, Jia R, Duan Z, Huang P, Stripp ST, Barlow CK, Belousoff M, Shafaat HS, Cook GM, Schittenhelm RB, Vincent KA, Khalid S, Berggren G, Greening C
Nature (2023) 615 pp. 541-547 [ DOI: doi:10.1038/s41586-023-05781-7 Pubmed: 36890228 ]
- Complex of the type 2 [nife]-hydrogenase huc from mycobacterium smegmatis (833 kDa, Complex from Mycolicibacterium smegmatis)
- Magnesium ion (24 Da, Ligand)
- Hydrogenase-2, large subunit (57 kDa, Protein from Mycolicibacterium smegmatis)
- Hydrogenase-2, small subunit (35 kDa, Protein from Mycolicibacterium smegmatis)
- Water (18 Da, Ligand)
- Fe3-s4 cluster (295 Da, Ligand)
- Carbonmonoxide-(dicyano) iron (135 Da, Ligand)
- Menadione (172 Da, Ligand)
- Nickel (iii) ion (58 Da, Ligand)
- Oxygen atom (15 Da, Ligand)