Kim HJ, Szurgot MR, van Eeuwen T, Ricketts MD, Basnet P, Zhang AL, Vogt A, Sharmin S, Kaplan CD, Garcia BA, Marmorstein R, Murakami K
Mol Cell (2024) 84 pp. 2601-2617.e12 [ Pubmed: 38925115 DOI: doi:10.1016/j.molcel.2024.05.031 ]
DNAPKcs-Ku-LigIV(BRCT)-PAXX-DNA subcomplex in PAXX-LR complex
Chen S, Vogt A, Lee L, Naila T, McKeown R, Tomkinson AE, Lees-Miller SP, He Y
Sci Adv (2023) 9 pp. eadg2838-eadg2838 [ Pubmed: 37256947 DOI: doi:10.1126/sciadv.adg2838 ]
- Nhej long-range complex with paxx (1 MDa, Complex)
- Xrcc5_human x-ray repair cross complementing protein 5 (Protein from Homo sapiens)
- Paxx_human protein paxx (Protein from Homo sapiens)
- Dna(31-mer) (DNA from Homo sapiens)
- Dna(30-mer) (DNA from Homo sapiens)
- Dnli4_huamn dna ligase 4 (Protein from Homo sapiens)
- Prkdc_human dna-dependent protein kinase catalytic subunit (Protein from Homo sapiens)
- Xrcc6_human (Protein from Homo sapiens)
Structure of ACLY in the presence of citrate and CoA
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 6uuz
Q-score: 0.487
Wei X, Schultz K, Bazilevsky GA, Vogt A, Marmorstein R
Nat Struct Mol Biol (2020) 27 pp. 33-41 [ DOI: doi:10.1038/s41594-019-0351-6 Pubmed: 31873304 ]
- Atp-citrate synthase (120 kDa, Protein from Homo sapiens)
- Coenzyme a (767 Da, Ligand)
- Water (18 Da, Ligand)
- Acly, citrate and coa (480 kDa, Complex from Homo sapiens)
Structure of ACLY in complex with CoA
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 6poe
Q-score: 0.475
Wei X, Schultz K, Bazilevsky GA, Vogt A, Marmorstein R
Nat Struct Mol Biol (2020) 27 pp. 33-41 [ DOI: doi:10.1038/s41594-019-0351-6 Pubmed: 31873304 ]
- Acly in complex with coa (480 kDa, Complex from Homo sapiens)
- Coenzyme a (767 Da, Ligand)
- Water (18 Da, Ligand)
- Atp-citrate synthase (120 kDa, Protein from Homo sapiens)
Structure of human ATP citrate lyase in complex with acetyl-CoA and oxaloacetate
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 6ui9
Q-score: 0.474
Wei X, Schultz K, Bazilevsky GA, Vogt A, Marmorstein R
Nat Struct Mol Biol (2020) 27 pp. 33-41 [ DOI: doi:10.1038/s41594-019-0351-6 Pubmed: 31873304 ]
- Acly (120 kDa, Protein from Homo sapiens)
- Acetyl coenzyme *a (809 Da, Ligand)
- Oxaloacetate ion (131 Da, Ligand)
- Acly in complex with acetyl-coa and oxaloacetate (480 kDa, Complex from Homo sapiens)
- Water (18 Da, Ligand)
Structure of human ATP citrate lyase in complex with acetyl-CoA and oxaloacetate
Resolution: 3.4 Å
EM Method: Single-particle
Fitted PDBs: 6uv5
Q-score: 0.459
Wei X, Schultz K, Bazilevsky GA, Vogt A, Marmorstein R
Nat Struct Mol Biol (2020) 27 pp. 33-41 [ DOI: doi:10.1038/s41594-019-0351-6 Pubmed: 31873304 ]
- Atp citrate lyase (120 kDa, Protein from Homo sapiens)
- Acetyl coenzyme *a (809 Da, Ligand)
- Oxaloacetate ion (131 Da, Ligand)
- Acly in complex with acetyl-coa and oxaloacetate (480 kDa, Complex from Homo sapiens)
- Water (18 Da, Ligand)