Resolution: 2.76 Å
EM Method: Single-particle
Fitted PDBs: 6cv1
Q-score: 0.619
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Water (18 Da, Ligand)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
CryoEM structure of human enterovirus D68 full virion
Resolution: 2.86 Å
EM Method: Single-particle
Fitted PDBs: 6cv2
Q-score: 0.608
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
CryoEM structure of human enterovirus D68 emptied particle
Resolution: 3.56 Å
EM Method: Single-particle
Fitted PDBs: 6cv3
Q-score: 0.472
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
Resolution: 3.03 Å
EM Method: Single-particle
Fitted PDBs: 6cv4
Q-score: 0.55
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
Resolution: 2.79 Å
EM Method: Single-particle
Fitted PDBs: 6cv5
Q-score: 0.622
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Water (18 Da, Ligand)
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine
Resolution: 2.43 Å
EM Method: Single-particle
Fitted PDBs: 6cvb
Q-score: 0.678
Baggen J, Liu Y, Lyoo H, van Vliet ALW, Wahedi M, de Bruin JW, Roberts RW, Overduin P, Meijer A, Rossmann MG, Thibaut HJ, van Kuppeveld FJM
Nat Commun (2019) 10 pp. 3171-3171 [ DOI: doi:10.1038/s41467-019-11256-z Pubmed: 31320648 ]
- Viral protein 1 (32 kDa, Protein from Enterovirus D68)
- Water (18 Da, Ligand)
- Viral protein 2 (27 kDa, Protein from Enterovirus D68)
- Viral protein 4 (7 kDa, Protein from Enterovirus D68)
- Enterovirus d68 (Virus from Enterovirus D68)
- Viral protein 3 (27 kDa, Protein from Enterovirus D68)
Coxsackievirus A24v in complex with the D1-D2 fragment of ICAM-1
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 6eit
Q-score: 0.49
Baggen J, Hurdiss DL, Zocher G, Mistry N, Roberts RW, Slager JJ, Guo H, van Vliet ALW, Wahedi M, Benschop K, Duizer E, de Haan CAM, de Vries E, Casasnovas JM, de Groot RJ, Arnberg N, Stehle T, Ranson NA, Thibaut HJ, van Kuppeveld FJM
PNAS (2018) 115 pp. 397-402 [ Pubmed: 29284752 DOI: doi:10.1073/pnas.1713284115 ]
- Vp2 (29 kDa, Protein from Coxsackievirus A24)
- D1 and d2 domains of icam-1 (Complex from homo sapiens)
- Coxsackievirus a24v in complex with the d1 and d2 domains of icam-1 (8 MDa, Complex)
- Vp1 (34 kDa, Protein from Coxsackievirus A24)
- Vp3 (26 kDa, Protein from Coxsackievirus A24)
- Intercellular adhesion molecule 1 (9 kDa, Protein from Homo sapiens)
- Coxsackievirus a24 (Complex from Coxsackievirus A24)