Guillardia theta Fanzor (GtFz) State 1
Resolution: 4.7 Å
EM Method: Single-particle
Fitted PDBs: 9cer
Q-score: 0.197
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Rna (142-mer) (49 kDa, RNA from Guillardia theta)
- Gtfz-omegarna complex (Complex from Guillardia theta)
- Zinc ion (65 Da, Ligand)
- Maltose/maltodextrin-binding periplasmic protein,guillardia theta fanzor1 (124 kDa, Protein from Guillardia theta)
Guillardia theta Fanzor (GtFz) State 2
Resolution: 3.28 Å
EM Method: Single-particle
Fitted PDBs: 9ces
Q-score: 0.329
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Guillardia theta fanzor1-omegarna-target dna complex (Complex from Guillardia theta)
- Dna (5'-d(p*ap*tp*gp*ap*cp*tp*tp*cp*tp*cp*tp*tp*ap*ap*ap*gp*gp*cp*cp*cp*cp*gp*gp*g)-3') (14 kDa, DNA from synthetic construct)
- Dna (5'-d(p*cp*cp*cp*gp*gp*gp*gp*cp*cp*tp*tp*tp*ap*ap*g)-3') (5 kDa, DNA from synthetic construct)
- Maltose/maltodextrin-binding periplasmic protein,guillardia theta fanzor1 (124 kDa, Protein from Guillardia theta)
- Rna (142-mer) (49 kDa, RNA from Guillardia theta)
- Zinc ion (65 Da, Ligand)
Guillardia theta Fanzor (GtFz) State 3
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9cet
Q-score: 0.348
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Dna (28-mer) (24 kDa, DNA from synthetic construct)
- Dna (5'-d(p*ap*tp*gp*ap*cp*tp*tp*cp*tp*cp*tp*tp*ap*ap*ap*gp*gp*cp*cp*cp*cp*gp*gp*g)-3') (25 kDa, DNA from synthetic construct)
- Guillardia theta fanzor1-omegarna-target dna complex (Complex from Guillardia theta)
- Zinc ion (65 Da, Ligand)
- Rna (142-mer) (49 kDa, RNA from Guillardia theta)
- Maltose/maltodextrin-binding periplasmic protein,guillardia theta fanzor1 (124 kDa, Protein from Guillardia theta)
Parasitella parasitica Fanzor (PpFz) State 1
Resolution: 3.47 Å
EM Method: Single-particle
Fitted PDBs: 9cf0
Q-score: 0.412
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Maltose/maltodextrin-binding periplasmic protein,parasitella parasitica fanzor 1 (144 kDa, Protein from Parasitella parasitica)
- Peptidyl-prolyl cis-trans isomerase (17 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Dna non-target strand (17 kDa, DNA from synthetic construct)
- Ternary complex of ppfz1-omegarna-dna (Complex from Parasitella parasitica)
- Parasitella parasitica fanzor 1 omegarna (19 kDa, RNA from Parasitella parasitica)
- Dna target strand (17 kDa, DNA from synthetic construct)
Parasitella parasitica Fanzor (PpFz) State 2
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 9cf1
Q-score: 0.365
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Parasitella parasitica fanzor 1 omegarna (19 kDa, RNA from Parasitella parasitica)
- Ternary complex of ppfz1-omegarna-dna (Complex from Parasitella parasitica)
- Dna target strand (17 kDa, DNA from synthetic construct)
- Dna non-target strand (17 kDa, DNA from synthetic construct)
- Peptidyl-prolyl cis-trans isomerase (17 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Maltose/maltodextrin-binding periplasmic protein,parasitella parasitica fanzor 1 (144 kDa, Protein from Parasitella parasitica)
Parasitella parasitica Fanzor (PpFz) State 3
Resolution: 3.15 Å
EM Method: Single-particle
Fitted PDBs: 9cf2
Q-score: 0.399
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Parasitella parasitica fanzor 1 omegarna (19 kDa, RNA from Parasitella parasitica)
- Dna substrate model (3 kDa, DNA from synthetic construct)
- Ternary complex of ppfz1-omegarna-dna (Complex from Parasitella parasitica)
- Dna target strand (17 kDa, DNA from synthetic construct)
- Magnesium ion (24 Da, Ligand)
- Dna non-target strand (17 kDa, DNA from synthetic construct)
- Dna substrate model (3 kDa, DNA from synthetic construct)
- Peptidyl-prolyl cis-trans isomerase (17 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Maltose/maltodextrin-binding periplasmic protein,parasitella parasitica fanzor 1 (144 kDa, Protein from Parasitella parasitica)
Parasitella parasitica Fanzor (PpFz) State 4
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 9cf3
Q-score: 0.433
Xu P, Saito M, Faure G, Maguire S, Chau-Duy-Tam Vo S, Wilkinson ME, Kuang H, Wang B, Rice WJ, Macrae RK, Zhang F
Cell (2024) 187 pp. 5238-5252.e20 [ Pubmed: 39208796 DOI: doi:10.1016/j.cell.2024.07.050 ]
- Parasitella parasitica fanzor 1 omegarna (19 kDa, RNA from Parasitella parasitica)
- Ternary complex of ppfz1-omegarna-dna (Complex from Parasitella parasitica)
- Dna target strand (17 kDa, DNA from synthetic construct)
- Magnesium ion (24 Da, Ligand)
- Dna non-target strand (17 kDa, DNA from synthetic construct)
- Peptidyl-prolyl cis-trans isomerase (17 kDa, Protein from Saccharomyces cerevisiae)
- Zinc ion (65 Da, Ligand)
- Maltose/maltodextrin-binding periplasmic protein,parasitella parasitica fanzor 1 (144 kDa, Protein from Parasitella parasitica)