Cryo-EM structure of photosynthetic LH1' complex of Roseospirillum parvum
Resolution: 2.35 Å
EM Method: Single-particle
Fitted PDBs: 8zjw
Q-score: 0.699
Wang XP, Wang GL, Fu Y, Minamino A, Zou MJ, Ma F, Xu B, Wang-Otomo ZY, Kimura Y, Madigan MT, Overmann J, Yu LJ
Commun Biol (2024) 7 pp. 1658-1658 [ Pubmed: 39702771 DOI: doi:10.1038/s42003-024-07354-4 ]
- Lh1 prime complex (Complex from Roseospirillum parvum)
- Bacteriochlorophyll a (911 Da, Ligand)
- Beta subunit of light-harvesting 1 complex (7 kDa, Protein from Roseospirillum parvum)
- Alpha subunit of light-harvesting 1 complex (7 kDa, Protein from Roseospirillum parvum)
- Spirilloxanthin (596 Da, Ligand)
Cryo-EM structure of photosynthetic LH1-RC core complex of Roseospirillum parvum
Resolution: 2.65 Å
EM Method: Single-particle
Fitted PDBs: 8zk2
Q-score: 0.637
Wang XP, Wang GL, Fu Y, Minamino A, Zou MJ, Ma F, Xu B, Wang-Otomo ZY, Kimura Y, Madigan MT, Overmann J, Yu LJ
Commun Biol (2024) 7 pp. 1658-1658 [ Pubmed: 39702771 DOI: doi:10.1038/s42003-024-07354-4 ]
- Fe (iii) ion (55 Da, Ligand)
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Heme c (618 Da, Ligand)
- Photosynthetic reaction center cytochrome c subunit (39 kDa, Protein from Roseospirillum parvum)
- Bacteriochlorophyll a (911 Da, Ligand)
- Beta subunit of light-harvesting 1 complex (7 kDa, Protein from Roseospirillum parvum)
- Magnesium ion (24 Da, Ligand)
- Menaquinone 8 (717 Da, Ligand)
- Dodecyl-beta-d-maltoside (510 Da, Ligand)
- Photosynthetic reaction center h subunit (27 kDa, Protein from Roseospirillum parvum)
- Alpha subunit of light-harvesting 1 complex (7 kDa, Protein from Roseospirillum parvum)
- Bacteriopheophytin a (889 Da, Ligand)
- Octadecane (254 Da, Ligand)
- Spirilloxanthin (596 Da, Ligand)
- Lh1-rc core complex (Complex from Roseospirillum parvum)
- Reaction center protein l chain (30 kDa, Protein from Roseospirillum parvum)
- Reaction center protein m chain (35 kDa, Protein from Roseospirillum parvum)
Cryo-EM structure of the RC-LH core comples from Halorhodospira halochloris
Qi CH, Wang GL, Wang FF, Wang J, Wang XP, Zou MJ, Ma F, Madigan MT, Kimura Y, Wang-Otomo ZY, Yu LJ
J Integr Plant Biol (2024) 66 pp. 2262-2272 [ DOI: doi:10.1111/jipb.13628 Pubmed: 38411333 ]
- (1r)-2-{[{[(2s)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(palmitoyloxy)methyl]ethyl (11e)-octadec-11-enoate (749 Da, Ligand)
- Reaction center protein m chain (36 kDa, Protein from Halorhodospira halochloris)
- Heme c (618 Da, Ligand)
- Trans-geranyl bacteriopheophytin b (885 Da, Ligand)
- Trans-geranyl 8-vinyl-bacteriochlorophyll b (907 Da, Ligand)
- Beta subunit of light-harvesting 1 (9 kDa, Protein from Halorhodospira halochloris)
- Ubiquinone-8 (727 Da, Ligand)
- Photosynthetic reaction center h subunit (31 kDa, Protein from Halorhodospira halochloris)
- Reaction center protein l chain (31 kDa, Protein from Halorhodospira halochloris)
- Menaquinone 8 (717 Da, Ligand)
- Lycopene (536 Da, Ligand)
- Antenna complex alpha/beta subunit domain-containing protein (7 kDa, Protein from Halorhodospira halochloris)
- Rc-lh core complex (Complex from Halorhodospira halochloris)
- Photosynthetic reaction center cytochrome c subunit (41 kDa, Protein from Halorhodospira halochloris)
- Light-harvesting lhi (7 kDa, Protein from Halorhodospira halochloris)
- Trans-geranyl bacteriochlorophyll b (907 Da, Ligand)
- Antenna complex alpha/beta subunit domain-containing protein (12 kDa, Protein from Halorhodospira halochloris)
- 2-o-octyl-beta-d-glucopyranose (292 Da, Ligand)
- Fe (iii) ion (55 Da, Ligand)
- Reaction center small polypeptide (3 kDa, Protein from Halorhodospira halochloris)
- Gamma subunit of light-harvesting 1 (3 kDa, Protein from Halorhodospira halochloris)
- Cardiolipin (1 kDa, Ligand)
- Di-palmitoyl-3-sn-phosphatidylethanolamine (691 Da, Ligand)
- Reactin center small polypeptide (3 kDa, Protein from Halorhodospira halochloris)
- Unknown ligand (909 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)