TRiC-ADP-S2 state is a conformation when TRiC incubated in 1 mM ADP
Resolution: 5.6 Å
EM Method: Single-particle
Fitted PDBs: 9cs3
Q-score: 0.149
QRB DISCOV (2024) [ DOI: doi:10.1017/qrd.2024.17 ]
- T-complex protein 1 subunit beta (57 kDa, Protein from Saccharomyces cerevisiae)
- The other tric subunits (Complex from Saccharomyces cerevisiae)
- T-complex protein 1 subunit gamma (65 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit gamma (Complex from Saccharomyces cerevisiae)
- Tric at adp state 2 (Complex)
- T-complex protein 1 subunit epsilon (61 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit delta (57 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit eta (59 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit theta (61 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit zeta (59 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Saccharomyces cerevisiae)
TRiC-ADP-S5 state is a conformation when TRiC incubated in 1 mM ADP
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 9cs6
Q-score: 0.262
QRB DISCOV (2024) [ DOI: doi:10.1017/qrd.2024.17 ]
- T-complex protein 1 subunit beta (57 kDa, Protein from Saccharomyces cerevisiae)
- Tric at adp state 5 (Complex)
- The other tric subunits (Complex from Saccharomyces cerevisiae)
- T-complex protein 1 subunit gamma (65 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit epsilon (61 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit delta (57 kDa, Protein from Saccharomyces cerevisiae)
- Subunit gamma (Complex from Saccharomyces cerevisiae)
- T-complex protein 1 subunit eta (59 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit theta (61 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit zeta (59 kDa, Protein from Saccharomyces cerevisiae)
- T-complex protein 1 subunit alpha (60 kDa, Protein from Saccharomyces cerevisiae)
Structure of the HER2 (S310F) - pertuzumab (T30S/D31A) complex
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 9l1s
Q-score: 0.459
Bai X, Xu L, Wang Z, Zhuang X, Ning J, Sun Y, Wang H, Guo Y, Xu Y, Guo J, Chen S, Pan L
To Be Published
- Pertuzumab fab heavy chain (24 kDa, Protein from Homo sapiens)
- Receptor tyrosine-protein kinase erbb-2 (70 kDa, Protein from Homo sapiens)
- Her2 (s310f) - pertuzumab (t30s/d31a) complex (Complex from Homo sapiens)
- Pertuzumab fab light chain (23 kDa, Protein from Homo sapiens)
cryo-EM structure of calcineurin-fused beta2 adrenergic receptor in apo state
Resolution: 3.95 Å
EM Method: Single-particle
Fitted PDBs: 9chv
Q-score: 0.39
Xu J, Chen G, Wang H, Cao S, Heng J, Deupi X, Du Y, Kobilka BK
PNAS (2024) 121 pp. e2414544121-e2414544121 [ DOI: doi:10.1073/pnas.2414544121 Pubmed: 39565314 ]
- Calcineurin fused beta2ar in complex with fkbp12 (Complex)
- Fkbp1a (Complex from Homo sapiens)
- Calcineurin fused beta2ar (Complex from Homo sapiens)
- Protein phosphatase 3 catalytic subunit alpha (Complex from Mus musculus)
- Beta-2 adrenergic receptor,calcineurin subunit b type 1 (51 kDa, Protein from Homo sapiens)
- Peptidyl-prolyl cis-trans isomerase fkbp1a (11 kDa, Protein from Homo sapiens)
- 8-deethyl-8-[but-3-enyl]-ascomycin (804 Da, Ligand)
- Protein phosphatase 3 catalytic subunit alpha (42 kDa, Protein from Mus musculus)
cryo-EM structure of calcineurin-fused beta2 adrenergic receptor in carazolol bound inactive state
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 9chx
Q-score: 0.431
Xu J, Chen G, Wang H, Cao S, Heng J, Deupi X, Du Y, Kobilka BK
PNAS (2024) 121 pp. e2414544121-e2414544121 [ DOI: doi:10.1073/pnas.2414544121 Pubmed: 39565314 ]
- Calcineurin fused beta2ar in complex with fkbp12 (Complex)
- Fkbp1a (Complex from Homo sapiens)
- Calcineurin fused beta2ar (Complex from Homo sapiens)
- Protein phosphatase 3 catalytic subunit alpha (Complex from Mus musculus)
- (2s)-1-(9h-carbazol-4-yloxy)-3-(isopropylamino)propan-2-ol (298 Da, Ligand)
- Beta-2 adrenergic receptor,calcineurin subunit b type 1 (51 kDa, Protein from Homo sapiens)
- Peptidyl-prolyl cis-trans isomerase fkbp1a (11 kDa, Protein from Homo sapiens)
- 8-deethyl-8-[but-3-enyl]-ascomycin (804 Da, Ligand)
- Protein phosphatase 3 catalytic subunit alpha (42 kDa, Protein from Mus musculus)
Caenorhabditis elegans ACR-23 in betaine and monepantel bound state
Resolution: 2.64 Å
EM Method: Single-particle
Fitted PDBs: 8zfk
Q-score: 0.622
Liu F, Li T, Gong H, Tian F, Bai Y, Wang H, Yang C, Li Y, Guo F, Liu S, Chen Q
EMBO J (2024) 43 pp. 3787-3806 [ DOI: doi:10.1038/s44318-024-00165-7 Pubmed: 39009676 ]
- Water (18 Da, Ligand)
- ~{n}-[(2~{s})-2-cyano-1-[5-cyano-2-(trifluoromethyl)phenoxy]propan-2-yl]-4-(trifluoromethylsulfanyl)benzamide (473 Da, Ligand)
- Betaine receptor acr-23,soluble cytochrome b562 (70 kDa, Protein from Caenorhabditis elegans)
- Acetylcholine receptor like-23(acr-23) (67 kDa, Complex from Caenorhabditis elegans)
- Trimethyl glycine (118 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Caenorhabditis elegans ACR-23 in betaine bound state
Resolution: 2.96 Å
EM Method: Single-particle
Fitted PDBs: 8zfm
Q-score: 0.58
Liu F, Li T, Gong H, Tian F, Bai Y, Wang H, Yang C, Li Y, Guo F, Liu S, Chen Q
EMBO J (2024) 43 pp. 3787-3806 [ DOI: doi:10.1038/s44318-024-00165-7 Pubmed: 39009676 ]
- Water (18 Da, Ligand)
- Betaine receptor acr-23,soluble cytochrome b562 (70 kDa, Protein from Caenorhabditis elegans)
- Acetylcholine receptor like-23(acr-23) (67 kDa, Complex from Caenorhabditis elegans)
- Trimethyl glycine (118 Da, Ligand)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.26 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sxz
Q-score: 0.402
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ DOI: doi:10.1016/j.devcel.2024.04.008 Pubmed: 38663399 ]
- Gdp-bound human dynamin helical polymer assembled on the membrane (85 MDa, Complex from Homo sapiens)
- Guanosine-5'-diphosphate (443 Da, Ligand)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
Resolution: 2.86 Å
EM Method: Helical reconstruction
Fitted PDBs: 8sz4
Q-score: 0.344
Jimah JR, Kundu N, Stanton AE, Sochacki KA, Canagarajah B, Chan L, Strub MP, Wang H, Taraska JW, Hinshaw JE
Dev Cell (2024) 59 pp. 1783- [ DOI: doi:10.1016/j.devcel.2024.04.008 Pubmed: 38663399 ]
- Gdp-bound human dynamin helical polymer assembled on the membrane (85 MDa, Complex from Homo sapiens)
- Dynamin-1 (86 kDa, Protein from Homo sapiens)