Structure of the repeat unit in the network formed by CcmM and Rubisco from Synechococcus elongatus
Resolution: 2.78 Å
EM Method: Single-particle
Fitted PDBs: 6hbc
Q-score: 0.619
Wang H, Yan X, Aigner H, Bracher A, Nguyen ND, Hee WY, Long BM, Price GD, Hartl FU, Hayer-Hartl M
Nature (2019) 566 pp. 131-135 [ Pubmed: 30675061 DOI: doi:10.1038/s41586-019-0880-5 ]
- Carbon dioxide concentrating mechanism protein ccmm (10 kDa, Protein from Synechococcus elongatus (strain PCC 7942))
- Repeat unit in the ccmm-rubisco network consisting of a ssul domain from ccmm and each two rbcl and two rbcs chains from rubisco (Complex from Synechococcus elongatus PCC 7942)
- Ribulose bisphosphate carboxylase large chain (52 kDa, Protein from Synechococcus elongatus (strain PCC 7942))
- Ribulose 1,5-bisphosphate carboxylase small subunit (13 kDa, Protein from Synechococcus elongatus (strain PCC 7942))
A nucleosome bridging mechanism for activation of a maintenance DNA methyltransferase
Stoddard CI, Feng S, Campbell MG, Liu W, Wang H, Zhong X, Bernatavichute Y, Cheng Y, Jacobsen SE, Narlikar GJ
Mol Cell (2019) 73 pp. 73-83.e6 [ DOI: doi:10.1016/j.molcel.2018.10.006 Pubmed: 30415948 ]
BG505 SOSIP in complex with sCD4, 17b, 8ANC195
Resolution: 3.54 Å
EM Method: Single-particle
Fitted PDBs: 6cm3
Q-score: 0.465
Wang H, Barnes CO, Yang Z, Nussenzweig MC, Bjorkman PJ
Cell Host Microbe (2018) 24 pp. 579-592.e4 [ Pubmed: 30308160 DOI: doi:10.1016/j.chom.2018.09.003 ]
- 8anc195 fab heavy chain (26 kDa, Protein from Homo sapiens)
- 17b fab heavy chain (24 kDa, Protein from Homo sapiens)
- Bg505 sosip in complex with scd4, 17b, 8anc195 (Complex from Human immunodeficiency virus 1)
- Envelope glycoprotein gp160 (17 kDa, Protein from Human immunodeficiency virus 1)
- 8anc195 fab light chain (23 kDa, Protein from Homo sapiens)
- 17b fab light chain (23 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- T-cell surface glycoprotein cd4 (21 kDa, Protein from Homo sapiens)
- Envelope glycoprotein gp160 (54 kDa, Protein from Human immunodeficiency virus 1)
Resolution: 4.06 Å
EM Method: Single-particle
Fitted PDBs: 6edu
Q-score: 0.36
Wang H, Barnes CO, Yang Z, Nussenzweig MC, Bjorkman PJ
Cell Host Microbe (2018) 24 pp. 579-592.e4 [ Pubmed: 30308160 DOI: doi:10.1016/j.chom.2018.09.003 ]
- Envelope glycoprotein gp160 (57 kDa, Protein from Human immunodeficiency virus 1)
- B41 sosip-scd4-21c-8anc195 complex (700 kDa, Complex from Homo sapiens)
- 8anc195 g52k5 fab vl domain (23 kDa, Protein from Homo sapiens)
- Envelope glycoprotein gp160 (17 kDa, Protein from Human immunodeficiency virus 1)
- 21c fab vh domain (24 kDa, Protein from Homo sapiens)
- 8anc195 g52k5 fab vh domain (26 kDa, Protein from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- 21c fab vl domain (22 kDa, Protein from Homo sapiens)
- T-cell surface glycoprotein cd4 (20 kDa, Protein from Homo sapiens)
Resolution: 3.75 Å
EM Method: Helical reconstruction
Fitted PDBs: 6dlu
Q-score: 0.363
Kong L, Sochacki KA, Wang H, Fang S, Canagarajah B, Kehr AD, Rice WJ, Strub MP, Taraska JW, Hinshaw JE
Nature (2018) 560 pp. 258-262 [ Pubmed: 30069048 DOI: doi:10.1038/s41586-018-0378-6 ]
- Magnesium ion (24 Da, Ligand)
- Dynamin-1 (85 kDa, Protein from Homo sapiens)
- Gmppcp-bound human dynamin-1 helical polymer encasing a phosphatidylserine lipid membrane bilayer tube (98 MDa, Complex from Homo sapiens)
- Phosphomethylphosphonic acid guanylate ester (521 Da, Ligand)
Resolution: 10.1 Å
EM Method: Helical reconstruction
Fitted PDBs: 6dlv
Q-score: 0.133
Kong L, Sochacki KA, Wang H, Fang S, Canagarajah B, Kehr AD, Rice WJ, Strub MP, Taraska JW, Hinshaw JE
Nature (2018) 560 pp. 258-262 [ Pubmed: 30069048 DOI: doi:10.1038/s41586-018-0378-6 ]
Yeast TRiC/CCT with PA tag insertion in CCT6 subunits
Wang H, Han W, Takagi J, Cong Y
J Mol Biol (2018) [ Pubmed: 29625202 DOI: doi:10.1016/j.jmb.2018.03.026 ]
- T-complex protein 1 subunit delta (Protein from Saccharomyces cerevisiae S288c)
- Yeast tric/cct with pa tag in cct6 subunits (1 MDa, Complex from Saccharomyces cerevisiae)
- T-complex protein 1 subunit alpha (Protein from Saccharomyces cerevisiae S288c)
- T-complex protein 1 subunit beta (Protein from Saccharomyces cerevisiae S288c)
- T-complex protein 1 subunit zeta (Protein from Saccharomyces cerevisiae S288c)
- T-complex protein 1 subunit gamma (Protein from Saccharomyces cerevisiae S288c)
- T-complex protein 1 subunit eta (Protein from Saccharomyces cerevisiae S288c)
- T-complex protein 1 subunit theta (Protein from Saccharomyces cerevisiae S288c)
- T-complex protein 1 subunit epsilon (Protein from Saccharomyces cerevisiae S288c)