Yeast Dmc1 presynaptic complex
Resolution: 3.21 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ej6
Q-score: 0.524
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ DOI: doi:10.1093/nar/gkab1141 Pubmed: 34871438 ]
- Hlj1_g0016300.mrna.1.cds.1 (36 kDa, Protein from Saccharomyces cerevisiae)
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Yeast dmc1 presynaptic complex (Complex from Saccharomyces cerevisiae)
Yeast Dmc1 post-synaptic complex
Resolution: 3.41 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ej7
Q-score: 0.505
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ DOI: doi:10.1093/nar/gkab1141 Pubmed: 34871438 ]
- Hlj1_g0016300.mrna.1.cds.1 (36 kDa, Protein from Saccharomyces cerevisiae)
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Saccharomyces cerevisiae)
- Yeast dmc1 post-synaptic complex (Complex from Saccharomyces cerevisiae)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Dna (5'-d(p*ap*ap*ap*ap*ap*ap*ap*ap*a)-3') (2 kDa, DNA from Saccharomyces cerevisiae)
human RAD51 presynaptic complex
Resolution: 2.97 Å
EM Method: Helical reconstruction
Fitted PDBs: 7ejc
Q-score: 0.554
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ DOI: doi:10.1093/nar/gkab1141 Pubmed: 34871438 ]
- Dna (Complex from Homo sapiens)
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Homo sapiens)
- Dna repair protein rad51 homolog 1 (37 kDa, Protein from Homo sapiens)
- Human rad51 (Complex from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Human rad51 presynaptic complex (Complex)
- 4-bromanyl-n-(4-bromophenyl)-3-[(phenylmethyl)sulfamoyl]benzamide (524 Da, Ligand)
hRAD51 mutation 273-DG-274 postsynaptic complex with dsDNA after strand exchange process.
human RAD51 post-synaptic complex
Resolution: 3.98 Å
EM Method: Helical reconstruction
Fitted PDBs: 7eje
Q-score: 0.382
Xu J, Zhao L, Peng S, Chu H, Liang R, Tian M, Connell PP, Li G, Chen C, Wang HW
Nucleic Acids Res (2021) 49 pp. 13135-13149 [ DOI: doi:10.1093/nar/gkab1141 Pubmed: 34871438 ]
- Dna (5'-d(p*tp*tp*tp*tp*tp*tp*tp*tp*t)-3') (2 kDa, DNA from Homo sapiens)
- Dna (5'-d(p*ap*ap*ap*ap*ap*ap*ap*ap*a)-3') (2 kDa, DNA from Homo sapiens)
- Dna repair protein rad51 homolog 1 (37 kDa, Protein from Homo sapiens)
- Dna (Complex)
- Human rad51 post-synaptic complex (Complex from Homo sapiens)
- Phosphoaminophosphonic acid-adenylate ester (506 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Human rad51 (Complex)
cryo-EM structure of a pre-catalytic group II intron RNP
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7d0f
Q-score: 0.235
Liu N, Dong X, Hu C, Zeng J, Wang J, Wang J, Wang HW, Belfort M
Nucleic Acids Res (2020) 48 pp. 11185-11198 [ DOI: doi:10.1093/nar/gkaa773 Pubmed: 33021674 ]
- Group ii intron-ltrb rna (Complex from Lactococcus lactis subsp. cremoris)
- Rna (738-mer) (295 kDa, RNA from Lactococcus lactis subsp. cremoris)
- Group ii intron-encoded protein ltra (70 kDa, Protein from Lactococcus lactis subsp. cremoris)
- A group ii intron --ltrb complex with its reverse transcriptase (Complex)
- Ltra (Complex from Lactococcus lactis subsp. cremoris)
Cryo-EM structure of a pre-catalytic group II intron
Resolution: 5.0 Å
EM Method: Single-particle
Fitted PDBs: 7d0g
Q-score: 0.24
Liu N, Dong X, Hu C, Zeng J, Wang J, Wang J, Wang HW, Belfort M
Nucleic Acids Res (2020) 48 pp. 11185-11198 [ DOI: doi:10.1093/nar/gkaa773 Pubmed: 33021674 ]
- Rna (714-mer) (295 kDa, RNA from Lactococcus lactis subsp. cremoris)
- Rna (Complex from Lactococcus lactis subsp. cremoris)
- Group ii intron-encoded protein ltra (70 kDa, Protein from Lactococcus lactis subsp. cremoris)
- A group ii intron -- ltrb complex with its reverse transcriptase (Complex)
- Ltrb (Complex from Lactococcus lactis subsp. cremoris)