E. coli BAM complex (BamABCDE) bound to darobactin B
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8bvq
Q-score: 0.444
Haysom SF, Machin J, Whitehouse JM, Horne JE, Fenn K, Ma Y, El Mkami H, Bohringer N, Schaberle TF, Ranson NA, Radford SE, Pliotas C
Angew Chem Int Ed Engl (2023) 62 pp. e202218783-e202218783 [ DOI: doi:10.1002/anie.202218783 Pubmed: 37162386 ]
- Darobactin-b (1 kDa, Protein from Photorhabdus heterorhabditis)
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli)
- E. coli bam complex (bamabcde) bound to darobactin b (200 kDa, Complex from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
E. coli BAM complex (BamABCDE) wild-type
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8bwc
Q-score: 0.482
Haysom SF, Machin J, Whitehouse JM, Horne JE, Fenn K, Ma Y, El Mkami H, Bohringer N, Schaberle TF, Ranson NA, Radford SE, Pliotas C
Angew Chem Int Ed Engl (2023) 62 pp. e202218783-e202218783 [ DOI: doi:10.1002/anie.202218783 Pubmed: 37162386 ]
- Outer membrane protein assembly factor bamd (25 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bamc (34 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bama, bamc, bamd and bame (Complex from Escherichia coli)
- Outer membrane protein assembly factor bamb (Complex from Escherichia coli BL21(DE3))
- E. coli bam complex (bamabcde) wild-type (200 kDa, Complex)
- Outer membrane protein assembly factor bamb (39 kDa, Protein from Escherichia coli BL21(DE3))
- Outer membrane protein assembly factor bama (88 kDa, Protein from Escherichia coli)
- Outer membrane protein assembly factor bame (11 kDa, Protein from Escherichia coli)
Lateral-closed conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) by cryoEM
Resolution: 4.1 Å
EM Method: Single-particle
Fitted PDBs: 7bnq
Q-score: 0.428
White P, Haysom SF, Iadanza MG, Higgins AJ, Machin JM, Whitehouse JM, Horne JE, Schiffrin B, Carpenter-Platt C, Calabrese AN, Storek KM, Rutherford ST, Brockwell DJ, Ranson NA, Radford SE
Nat Commun (2021) 12 pp. 4174-4174 [ DOI: doi:10.1038/s41467-021-24432-x Pubmed: 34234105 ]
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bama (90 kDa, Protein from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli (strain K12))
- Beta-barrel assembly machinery (bam) complex (bamabcde) (203 kDa, Complex from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli (strain K12))
Lateral-open conformation of the lid-locked BAM complex (BamA E435C S665C, BamBDCE) by cryoEM
Resolution: 4.8 Å
EM Method: Single-particle
Fitted PDBs: 7nbx
Q-score: 0.306
White P, Haysom SF, Iadanza MG, Higgins AJ, Machin JM, Whitehouse JM, Horne JE, Schiffrin B, Carpenter-Platt C, Calabrese AN, Storek KM, Rutherford ST, Brockwell DJ, Ranson NA, Radford SE
Nat Commun (2021) 12 pp. 4174-4174 [ DOI: doi:10.1038/s41467-021-24432-x Pubmed: 34234105 ]
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bama (90 kDa, Protein from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli (strain K12))
- Beta-barrel assembly machinery (bam) complex (bamabcde) (203 kDa, Complex from Escherichia coli K-12)
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli (strain K12))
structure of a POTRA-locked BAM complex in a lateral-open conformation
White P, Haysom SF, Iadanza MG, Higgins AJ, Machin JM, Whitehouse JM, Horne JE, Schiffrin B, Carpenter-Platt C, Calabrese AN, Storek KM, Rutherford ST, Brockwell DJ, Ranson NA, Radford SE
Nat Commun (2021) 12 pp. 4174-4174 [ DOI: doi:10.1038/s41467-021-24432-x Pubmed: 34234105 ]
- Outer membrane protein assembly factor bama (Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamd (Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bame (Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamb (Protein from Escherichia coli K-12)
- Potra-locked beta-barrel assembly machinery (bam) complex (203 kDa, Complex from Escherichia coli (strain K12))
- Outer membrane protein assembly factor bamc (Protein from Escherichia coli K-12)
Resolution: 7.1 Å
EM Method: Single-particle
Fitted PDBs: 7ncs
Q-score: 0.218
White P, Haysom SF, Iadanza MG, Higgins AJ, Machin JM, Whitehouse JM, Horne JE, Schiffrin B, Carpenter-Platt C, Calabrese AN, Storek KM, Rutherford ST, Brockwell DJ, Ranson NA, Radford SE
Nat Commun (2021) 12 pp. 4174-4174 [ DOI: doi:10.1038/s41467-021-24432-x Pubmed: 34234105 ]
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli K-12 )
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli K-12 )
- Fab1 light chain (23 kDa, Protein from Homo sapiens)
- Light and heavy chains of bactericidal fab fragment fab1 (Complex from Homo sapiens)
- Lid-locked beta-barrel assembly machinery (bam) complex (bamabcde) (Complex from Escherichia coli (strain K12))
- Fab1 heavy chain (24 kDa, Protein from Homo sapiens)
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli K-12 )
- Lid-locked beta-barrel assembly machinery (bam) complex (bamabcde) bound by a bactericidal fab fragment (48 kDa, Complex)
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli K-12 )
- Outer membrane protein assembly factor bama (90 kDa, Protein from Escherichia coli K-12 )
Resolution: 5.2 Å
EM Method: Single-particle
Fitted PDBs: 7nd0
Q-score: 0.252
White P, Haysom SF, Iadanza MG, Higgins AJ, Machin JM, Whitehouse JM, Horne JE, Schiffrin B, Carpenter-Platt C, Calabrese AN, Storek KM, Rutherford ST, Brockwell DJ, Ranson NA, Radford SE
Nat Commun (2021) 12 pp. 4174-4174 [ DOI: doi:10.1038/s41467-021-24432-x Pubmed: 34234105 ]
- Outer membrane protein assembly factor bamd (27 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bama (90 kDa, Protein from Escherichia coli K-12)
- Wild-type beta-barrel assembly machinery (bam) complex (bamabcde) bound by a bactericidal fab fragment (48 kDa, Complex from Escherichia coli (strain K12))
- Light and heavy chains of bactericidal fab fragment fab1 (Complex from Homo sapiens)
- Fab1 light chain (23 kDa, Protein from Homo sapiens)
- Outer membrane protein assembly factor bame (13 kDa, Protein from Escherichia coli K-12)
- Fab1 heavy chain (24 kDa, Protein from Homo sapiens)
- Outer membrane protein assembly factor bamc (36 kDa, Protein from Escherichia coli K-12)
- Outer membrane protein assembly factor bamb (41 kDa, Protein from Escherichia coli K-12)
- Wild-type beta-barrel assembly machinery (bam) complex (bamabcde) (Complex from Escherichia coli (strain K12))