Complex between MLL1-WRAD and an H2B-ubiquitinated nucleosome- State 1
Rahman S, Hoffmann NA, Worden EJ, Smith ML, Namitz KEW, Knutson BA, Cosgrove MS, Wolberger C
PNAS (2022) 119 pp. e2205691119-e2205691119 [ DOI: doi:10.1073/pnas.2205691119 Pubmed: 36095189 ]
Complex between MLL1-WRAD and an H2B-ubiquitinated nucleosome
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 7ud5
Q-score: 0.263
Rahman S, Hoffmann NA, Worden EJ, Smith ML, Namitz KEW, Knutson BA, Cosgrove MS, Wolberger C
PNAS (2022) 119 pp. e2205691119-e2205691119 [ DOI: doi:10.1073/pnas.2205691119 Pubmed: 36095189 ]
- Protein dpy-30 homolog (11 kDa, Protein from Homo sapiens)
- Nucleosome (Complex from Xenopus laevis)
- Mll1 wrad complex bound to the ubiquitinated nucleosome (Complex)
- Zinc ion (65 Da, Ligand)
- Histone h3 (15 kDa, Protein from Xenopus laevis)
- Histone h2a (14 kDa, Protein from Xenopus laevis)
- Retinoblastoma-binding protein 5 (59 kDa, Protein from Homo sapiens)
- Set1/ash2 histone methyltransferase complex subunit ash2 (60 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 5 (36 kDa, Protein from Homo sapiens)
- S-adenosyl-l-homocysteine (384 Da, Ligand)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- Mll1 wrad complex (Complex from Homo sapiens)
- 601 dna (146-mer) (45 kDa, DNA from synthetic construct)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- 601 dna (146-mer) (44 kDa, DNA from synthetic construct)
- Cdna flj56846, highly similar to zinc finger protein hrx (26 kDa, Protein from Homo sapiens)
- Polyubiquitin-b (9 kDa, Protein from Homo sapiens)
Complex between RbBP5-WDR5 and an H2B-ubiquitinated nucleosome
Resolution: 3.55 Å
EM Method: Single-particle
Fitted PDBs: 8du4
Q-score: 0.237
Rahman S, Hoffmann NA, Worden EJ, Smith ML, Namitz KEW, Knutson BA, Cosgrove MS, Wolberger C
PNAS (2022) 119 pp. e2205691119-e2205691119 [ DOI: doi:10.1073/pnas.2205691119 Pubmed: 36095189 ]
- Rbbp5-wdr5 complex (Complex from Homo sapiens)
- Histone h3 (15 kDa, Protein from Xenopus laevis)
- Histone h2a (14 kDa, Protein from Xenopus laevis)
- Histone h2b 1.1 (13 kDa, Protein from Xenopus laevis)
- Retinoblastoma-binding protein 5 (59 kDa, Protein from Homo sapiens)
- Wd repeat-containing protein 5 (36 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Xenopus laevis)
- 601 dna (146-mer) (45 kDa, DNA from synthetic construct)
- Ubiquitinated nucleosome (Complex from Xenopus laevis)
- 601 dna (146-mer) (44 kDa, DNA from synthetic construct)
- Polyubiquitin-b (9 kDa, Protein from Homo sapiens)
- Rbbp5-wdr5 complex bound to the ubiquitinated nucleosome (Complex)
Complex between MLL1-WRAD and an H2B-ubiquitinated nucleosome- State 3
Rahman S, Hoffmann NA, Worden EJ, Smith ML, Namitz KEW, Knutson BA, Cosgrove MS, Wolberger C
PNAS (2022) 119 pp. e2205691119-e2205691119 [ DOI: doi:10.1073/pnas.2205691119 Pubmed: 36095189 ]