Cryo-EM structure of complement C4b in complex with nanobody E3
Resolution: 3.39 Å
EM Method: Single-particle
Fitted PDBs: 7b2m
Q-score: 0.445
De la O Becerra KI, Oosterheert W, van den Bos RM, Xenaki KT, Lorent JH, Ruyken M, Schouten A, Rooijakkers SHM, van Bergen En Henegouwen PMP, Gros P
J Immunol. (2022) 208 pp. 2207-2219 [ DOI: doi:10.4049/jimmunol.2100647 Pubmed: 35428691 ]
- Complement c4 gamma chain (33 kDa, Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Complement c4 gamma chain (33 kDa, Protein from Homo sapiens)
- Complement c4 alpha chain (84 kDa, Complex from Homo sapiens)
- Complement c4 beta chain (72 kDa, Complex from Homo sapiens)
- Complement c4 alpha chain (84 kDa, Protein from Homo sapiens)
- Complement c4b bound to nanobody e3 (203 kDa, Complex)
- Anti-c4b nanobody e3 (14 kDa, Protein from Lama glama)
- Nanobody e3 (14 kDa, Complex from Lama glama)
- Complement c4 beta chain (71 kDa, Protein from Homo sapiens)
Cryo-EM structure of complement C4b in complex with nanobody B5
Resolution: 3.43 Å
EM Method: Single-particle
Fitted PDBs: 7b2p
Q-score: 0.411
De la O Becerra KI, Oosterheert W, van den Bos RM, Xenaki KT, Lorent JH, Ruyken M, Schouten A, Rooijakkers SHM, van Bergen En Henegouwen PMP, Gros P
J Immunol. (2022) 208 pp. 2207-2219 [ DOI: doi:10.4049/jimmunol.2100647 Pubmed: 35428691 ]
- Complement c4 gamma chain (33 kDa, Complex from Homo sapiens)
- Complement c4b bound to nanobody b5 (204 kDa, Complex)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Complement c4 gamma chain (33 kDa, Protein from Homo sapiens)
- Complement c4 alpha chain (84 kDa, Complex from Homo sapiens)
- Complement c4 beta chain (72 kDa, Complex from Homo sapiens)
- Nanobody b5 (15 kDa, Complex from Lama glama)
- Complement c4 alpha chain (84 kDa, Protein from Homo sapiens)
- Nanobody b5 (15 kDa, Protein from Lama glama)
- Complement c4 beta chain (71 kDa, Protein from Homo sapiens)
Cryo-EM structure of complement C4b in complex with nanobody B12
Resolution: 3.76 Å
EM Method: Single-particle
Fitted PDBs: 7b2q
Q-score: 0.371
De la O Becerra KI, Oosterheert W, van den Bos RM, Xenaki KT, Lorent JH, Ruyken M, Schouten A, Rooijakkers SHM, van Bergen En Henegouwen PMP, Gros P
J Immunol. (2022) 208 pp. 2207-2219 [ DOI: doi:10.4049/jimmunol.2100647 Pubmed: 35428691 ]
- Complement c4 gamma chain (33 kDa, Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Complement c4 gamma chain (33 kDa, Protein from Homo sapiens)
- Anti-c4b nanobody b12 (15 kDa, Protein from Lama glama)
- Complement c4 alpha chain (84 kDa, Complex from Homo sapiens)
- Complement c4 beta chain (72 kDa, Complex from Homo sapiens)
- Complement c4 alpha chain (84 kDa, Protein from Homo sapiens)
- Nanobody b12 (15 kDa, Complex from Lama glama)
- Complement c4 beta chain (71 kDa, Protein from Homo sapiens)
- Complement c4b bound to nanobody b12 (204 kDa, Complex)
Cryo-EM density map of complement C4b in complex with nanobody G3
De la O Becerra KI, Oosterheert W, van den Bos RM, Xenaki KT, Lorent JH, Ruyken M, Schouten A, Rooijakkers SHM, van Bergen En Henegouwen PMP, Gros P
J Immunol. (2022) 208 pp. 2207-2219 [ DOI: doi:10.4049/jimmunol.2100647 Pubmed: 35428691 ]
- Nanobody g3 (Complex from Lama glama)
- Nanobody g3 (Protein from Lama glama)
- Complement c4b (Complex from Homo sapiens)
- Complement c4b bound to nanobody g3 (14 kDa, Complex)
- Complement c4b (Protein from Homo sapiens)
Cryo-EM density map of nanobody-4C8 bound, human CD9 in complex with EWI-F-deltaIg1-5
Oosterheert W, Xenaki KT, Neviani V, Pos W, Doulkeridou S, Manshande J, Pearce NM, Kroon-Batenburg LM, Lutz M, van Bergen En Henegouwen PM, Gros P
Life Sci Alliance (2020) 3 [ Pubmed: 32958604 DOI: doi:10.26508/lsa.202000883 ]
- Cd9 - ewi-f-deltaig1-5 complex (158 kDa, Complex from Homo sapiens)
- Ewi-f / cd9-partner-1 / fprp (Protein from Homo sapiens)
- Nanobody 4c8 molecule 2 (30 kDa, Complex from Lama glama)
- Cd9 (Protein from Homo sapiens)
- Nanobody 4c8 (Protein from Lama glama)
- Nanobody-4c8 bound, human cd9 in complex with ewi-f-deltaig1-5 (188 kDa, Complex)