SARS-CoV-2 BA.2.75 S Trimer in complex with ACE2(state1)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7yr2
Q-score: 0.354
Cao Y, Song W, Wang L, Liu P, Yue C, Jian F, Yu Y, Yisimayi A, Wang P, Wang Y, Zhu Q, Deng J, Fu W, Yu L, Zhang N, Wang J, Xiao T, An R, Wang J, Liu L, Yang S, Niu X, Gu Q, Shao F, Hao X, Meng B, Gupta RK, Jin R, Wang Y, Xie XS, Wang X
Cell Host Microbe (2022) 30 pp. 1527- [ Pubmed: 36270286 DOI: doi:10.1016/j.chom.2022.09.018 ]
- Water (18 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (69 kDa, Protein from Homo sapiens)
- Ace2 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Ba.2.75 s trimer (Complex)
- Zinc ion (65 Da, Ligand)
- Chloride ion (35 Da, Ligand)
- Ba.2.75 s trimer in complex with ace2 (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
SARS-CoV-2 BA.2.75 S Trimer in complex with ACE2(state2)
Resolution: 3.52 Å
EM Method: Single-particle
Fitted PDBs: 7yr3
Q-score: 0.314
Cao Y, Song W, Wang L, Liu P, Yue C, Jian F, Yu Y, Yisimayi A, Wang P, Wang Y, Zhu Q, Deng J, Fu W, Yu L, Zhang N, Wang J, Xiao T, An R, Wang J, Liu L, Yang S, Niu X, Gu Q, Shao F, Hao X, Meng B, Gupta RK, Jin R, Wang Y, Xie XS, Wang X
Cell Host Microbe (2022) 30 pp. 1527- [ Pubmed: 36270286 DOI: doi:10.1016/j.chom.2022.09.018 ]
- Ba.2.75 spike trimer in complex with ace2 (state2) (Complex from Severe acute respiratory syndrome coronavirus 2)
- Water (18 Da, Ligand)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Angiotensin-converting enzyme 2 (69 kDa, Protein from Homo sapiens)
- Ace2 (Complex)
- Zinc ion (65 Da, Ligand)
- Chloride ion (35 Da, Ligand)
- Ba.2.75 spike trimer (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
The structure of human ABCG5/ABCG8 purified from yeast
Resolution: 2.6 Å
EM Method: Single-particle
Fitted PDBs: 7r89
Q-score: 0.595
Sun Y, Wang J, Long T, Qi X, Donnelly L, Elghobashi-Meinhardt N, Esparza L, Cohen JC, Xie XS, Hobbs HH, Li X
PNAS (2021) 118 [ Pubmed: 34404721 DOI: doi:10.1073/pnas.2110483118 ]
- Atp-binding cassette sub-family g member 8 (80 kDa, Protein from Homo sapiens)
- Atp-binding cassette sub-family g member 5 (74 kDa, Protein from Homo sapiens)
- 2c7 fab heavy chain (26 kDa, Protein from Mus musculus)
- 2c7 fab light chain (25 kDa, Protein from Mus musculus)
- Abcg1 transporter (Complex from Homo sapiens)
- Ergosterol (396 Da, Ligand)
- Abcg1 transporter with ergosterol and fab 2c7 bound (150 kDa, Complex)
- Fab 2c7 (Complex from Mus musculus)
The structure of human ABCG5/ABCG8 purified from mammalian cells
Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 7r8a
Q-score: 0.552
Sun Y, Wang J, Long T, Qi X, Donnelly L, Elghobashi-Meinhardt N, Esparza L, Cohen JC, Xie XS, Hobbs HH, Li X
PNAS (2021) 118 [ Pubmed: 34404721 DOI: doi:10.1073/pnas.2110483118 ]
- Atp-binding cassette sub-family g member 8 (80 kDa, Protein from Homo sapiens)
- Atp-binding cassette sub-family g member 5 (74 kDa, Protein from Homo sapiens)
- Abcg1 transporter with cholesterol and fab 2c7 bound (150 kDa, Complex)
- 2c7 fab heavy chain (26 kDa, Protein from Mus musculus)
- 2c7 fab light chain (25 kDa, Protein from Mus musculus)
- Abcg1 transporter (Complex from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Fab 2c7 (Complex from Mus musculus)
The structure of human ABCG5/ABCG8 supplemented with cholesterol
Resolution: 3.1 Å
EM Method: Single-particle
Fitted PDBs: 7r8b
Q-score: 0.533
Sun Y, Wang J, Long T, Qi X, Donnelly L, Elghobashi-Meinhardt N, Esparza L, Cohen JC, Xie XS, Hobbs HH, Li X
PNAS (2021) 118 [ Pubmed: 34404721 DOI: doi:10.1073/pnas.2110483118 ]
- Atp-binding cassette sub-family g member 8 (80 kDa, Protein from Homo sapiens)
- Atp-binding cassette sub-family g member 5 (74 kDa, Protein from Homo sapiens)
- Abcg1 transporter with cholesterol and fab 2c7 bound (150 kDa, Complex)
- 2c7 fab heavy chain (26 kDa, Protein from Mus musculus)
- 2c7 fab light chain (25 kDa, Protein from Mus musculus)
- Abcg1 transporter with cholesterol bound (Complex from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Fab 2c7 (Complex from Mus musculus)
The structure of human ABCG1 E242Q with cholesterol
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7r8d
Q-score: 0.534
Sun Y, Wang J, Long T, Qi X, Donnelly L, Elghobashi-Meinhardt N, Esparza L, Cohen JC, Xie XS, Hobbs HH, Li X
PNAS (2021) 118 [ Pubmed: 34404721 DOI: doi:10.1073/pnas.2110483118 ]
- Isoform 4 of atp-binding cassette sub-family g member 1 (74 kDa, Protein from Homo sapiens)
- Cholesterol (386 Da, Ligand)
- Abcg1 transporter with cholesterol bound (150 kDa, Complex from Homo sapiens)
The structure of human ABCG1 E242Q complexed with ATP
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 7r8e
Q-score: 0.451
Sun Y, Wang J, Long T, Qi X, Donnelly L, Elghobashi-Meinhardt N, Esparza L, Cohen JC, Xie XS, Hobbs HH, Li X
PNAS (2021) 118 [ Pubmed: 34404721 DOI: doi:10.1073/pnas.2110483118 ]
- Isoform 4 of atp-binding cassette sub-family g member 1 (74 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Cholesterol (386 Da, Ligand)
- Abcg1 transporter with cholesterol and atp bound (150 kDa, Complex from Homo sapiens)