SARS-CoV-2 S-6P in complex with 9 Fabs
Resolution: 3.16 Å
EM Method: Single-particle
Fitted PDBs: 7e8c
Q-score: 0.39
Cao Y, Yisimayi A, Bai Y, Huang W, Li X, Zhang Z, Yuan T, An R, Wang J, Xiao T, Du S, Ma W, Song L, Li Y, Li X, Song W, Wu J, Liu S, Li X, Zhang Y, Su B, Guo X, Wei Y, Gao C, Zhang N, Zhang Y, Dou Y, Xu X, Shi R, Lu B, Jin R, Ma Y, Qin C, Wang Y, Feng Y, Xiao J, Xie XS
Cell Res (2021) 31 pp. 732-741 [ DOI: doi:10.1038/s41422-021-00514-9 Pubmed: 34021265 ]
- Sars-cov-2 s (Complex from Homo sapiens)
- 604 l (23 kDa, Protein from Homo sapiens)
- N9 l (22 kDa, Protein from Homo sapiens)
- 368-2 h (24 kDa, Protein from Homo sapiens)
- 368-2 l (23 kDa, Protein from Homo sapiens)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- N9 h (24 kDa, Protein from Homo sapiens)
- 604 h, 604 l, n9 h, 368-2 l, 368-2 h, n9 l (Complex)
- 604 h (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 s-6p in complex with 9 fabs (Complex from Severe acute respiratory syndrome coronavirus 2)
SARS-CoV-2 NTD in complex with N9 Fab
Resolution: 3.18 Å
EM Method: Single-particle
Fitted PDBs: 7e8f
Q-score: 0.592
Cao Y, Yisimayi A, Bai Y, Huang W, Li X, Zhang Z, Yuan T, An R, Wang J, Xiao T, Du S, Ma W, Song L, Li Y, Li X, Song W, Wu J, Liu S, Li X, Zhang Y, Su B, Guo X, Wei Y, Gao C, Zhang N, Zhang Y, Dou Y, Xu X, Shi R, Lu B, Jin R, Ma Y, Qin C, Wang Y, Feng Y, Xiao J, Xie XS
Cell Res (2021) 31 pp. 732-741 [ DOI: doi:10.1038/s41422-021-00514-9 Pubmed: 34021265 ]
- 604 h (23 kDa, Protein from Homo sapiens)
- N9, 368-2 and 604h fab (Complex)
- Sars-cov-2 ntd in complex with n9 fab (Complex from SARS coronavirus Tor2)
- 604 l (23 kDa, Protein from Homo sapiens)
- Spike protein s1 (25 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- N9 l (22 kDa, Protein from Homo sapiens)
- Spike protein s1 (33 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- 368-2 h (24 kDa, Protein from Homo sapiens)
- 368-2 l (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 ntd and rbd (Complex from Homo sapiens)
- N9 h (24 kDa, Protein from Homo sapiens)
Cryo-EM structure of the SARS-CoV-2 S-6P in complex with BD-368-2 Fabs
Resolution: 3.49 Å
EM Method: Single-particle
Fitted PDBs: 7chh
Q-score: -0.009
Du S, Cao Y, Zhu Q, Yu P, Qi F, Wang G, Du X, Bao L, Deng W, Zhu H, Liu J, Nie J, Zheng Y, Liang H, Liu R, Gong S, Xu H, Yisimayi A, Lv Q, Wang B, He R, Han Y, Zhao W, Bai Y, Qu Y, Gao X, Ji C, Wang Q, Gao N, Huang W, Wang Y, Xie XS, Su XD, Xiao J, Qin C
Cell (2020) 183 pp. 1013-1023.e13 [ DOI: doi:10.1016/j.cell.2020.09.035 Pubmed: 32970990 ]
- Spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike glycoprotein (Complex from Severe acute respiratory syndrome coronavirus 2)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Bd-368-2 fab heavy chain (24 kDa, Protein from Homo sapiens)
- Complex of the sars-cov-2 s-6p with bd-368-2 fabs (Complex)
- Bd-368-2 fab light chain (23 kDa, Protein from Homo sapiens)
- Bd-368-2 fabs (Complex from Homo sapiens)
BD23-Fab in complex with the S ectodomain trimer
Resolution: 3.84 Å
EM Method: Single-particle
Fitted PDBs: 7byr
Q-score: 0.441
Cao Y, Su B, Guo X, Sun W, Deng Y, Bao L, Zhu Q, Zhang X, Zheng Y, Geng C, Chai X, He R, Li X, Lv Q, Zhu H, Deng W, Xu Y, Wang Y, Qiao L, Tan Y, Song L, Wang G, Du X, Gao N, Liu J, Xiao J, Su XD, Du Z, Feng Y, Qin C, Qin C, Jin R, Xie XS
Cell (2020) 182 pp. 73-84.e16 [ Pubmed: 32425270 DOI: doi:10.1016/j.cell.2020.05.025 ]
- Ab23-fab (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Spike glycoprotein (138 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 spike glycoprotein (Complex from SARS coronavirus 2)
- Ab23-fab-heavy chain (13 kDa, Protein from Homo sapiens)
- Bd23-fab in complex with the s ectodomain trimer (Complex)
- Ab23-fab-light chain (11 kDa, Protein from Homo sapiens)