CryoEM structure of A/Perth/16/2009 H3 in complex with flu HA central stem VH1-18 antibody UCA6
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8ut3
Q-score: 0.58
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Uca6 lc fv (11 kDa, Protein from Homo sapiens)
- Uca6 hc fv (13 kDa, Protein from Homo sapiens)
- An uca6 fab complex with one protomer of a h3 trimer (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ut4
Q-score: 0.433
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- An 09-1b12 fab complex with one protomer of a h1 trimer (Complex from Influenza A virus)
- Hemagglutinin ha2 chain (28 kDa, Protein from Influenza A virus)
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus)
- 09-1b12 lc fv (12 kDa, Protein from Homo sapiens)
- 09-1b12 hc fv (13 kDa, Protein from Homo sapiens)
- 09-1b12 fab (Complex from Homo sapiens)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8ut5
Q-score: 0.439
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- Hemagglutinin ha2 chain (28 kDa, Protein from Influenza A virus)
- Hemagglutinin ha1 chain (36 kDa, Protein from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Uca6_n55t lc fv (11 kDa, Protein from Homo sapiens)
- Uca6_n55t hc fv (13 kDa, Protein from Homo sapiens)
- An uca6 fab complex with one protomer of a h3 trimer (Complex from Homo sapiens)
Resolution: 2.8 Å
EM Method: Single-particle
Fitted PDBs: 8ut6
Q-score: 0.549
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- H3d15 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- Mice polyclonal fab complex with one protomer of a h3 trimer (Complex from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- H3d15 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Polyclonal fab purified from mice sera (Complex from Mus musculus)
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8ut7
Q-score: 0.591
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- H3d28 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- A/perth/16/2009 h3 (Complex from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Hemagglutinin (62 kDa, Protein from Influenza A virus)
- Polyclonal fab purified from mice sera (Complex from Mus musculus)
- H3d28 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8ut8
Q-score: 0.442
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- Hemagglutinin ha1 chain (34 kDa, Protein from Influenza A virus)
- Hemagglutinin ha2 chain (26 kDa, Protein from Influenza A virus)
- H7d15 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- H7d15 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- Mice polyclonal fab complex with one protomer of a h7 trimer (Complex from Influenza A virus)
- H7d15 polyclonal fab purified from mice sera (Complex from Mus musculus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 8ut9
Q-score: 0.461
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
- H7d28 polyclonal fab purified from mice sera (Complex from Mus musculus)
- H7d28 pfab lc fv_polya (9 kDa, Protein from Mus musculus)
- H7d28 pfab hc fv_polya (10 kDa, Protein from Mus musculus)
- Hemagglutinin ha2 chain (26 kDa, Protein from Influenza A virus)
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Mice polyclonal fab complex with one protomer of a h7 trimer (Complex from Influenza A virus)
- Hemagglutinin ha1 chain (34 kDa, Protein from Influenza A virus)
CryoEM structure of A/Perth/16/2009 H3
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
CryoEM map of A/Shanghai/1/2013 H7 HA
Ray R, Nait Mohamed FA, Maurer DP, Huang J, Alpay BA, Ronsard L, Xie Z, Han J, Fernandez-Quintero M, Phan QA, Ursin RL, Vu M, Kirsch KH, Prum T, Rosado VC, Bracamonte-Moreno T, Okonkwo V, Bals J, McCarthy C, Nair U, Kanekiyo M, Ward AB, Schmidt AG, Batista FD, Lingwood D
Immunity (2024) 57 pp. 1141-1159.e11 [ DOI: doi:10.1016/j.immuni.2024.03.022 Pubmed: 38670113 ]
N332-GT2 trimer in complex with pooled polyclonal fab from BG18-exposed mice (day 14)
Tas JMJ, Koo JH, Lin YC, Xie Z, Steichen JM, Jackson AM, Hauser BM, Wang X, Cottrell CA, Torres JL, Warner JE, Kirsch KH, Weldon SR, Groschel B, Nogal B, Ozorowski G, Bangaru S, Phelps N, Adachi Y, Eskandarzadeh S, Kubitz M, Burton DR, Lingwood D, Schmidt AG, Nair U, Ward AB, Schief WR, Batista FD
Immunity (2022) 55 pp. 1856-1871.e6 [ Pubmed: 35987201 DOI: doi:10.1016/j.immuni.2022.07.020 ]