Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7wwu
Q-score: 0.413
Zhang M, Peng R, Peng Q, Liu S, Li Z, Zhang Y, Song H, Yang J, Xing X, Wang P, Qi J, Gao GF
PNAS (2023) 120 pp. e2215098120-e2215098120 [ Pubmed: 37094126 DOI: doi:10.1073/pnas.2215098120 ]
- Csy4 (21 kDa, Protein from Vibrio phage ICP1 2011 A)
- Csy2 (29 kDa, Protein from Vibrio phage ICP1 2011 A)
- Csy3 (35 kDa, Protein from Vibrio phage ICP1 2011 A)
- Guide-rna (19 kDa, RNA from Vibrio phage ICP1 2011 A)
- Apo-icp1 csy complex (Complex from Vibrio phage ICP1 2011 A)
- Csy1 (22 kDa, Protein from Vibrio phage ICP1 2011 A)
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7wwv
Q-score: 0.484
Zhang M, Peng R, Peng Q, Liu S, Li Z, Zhang Y, Song H, Yang J, Xing X, Wang P, Qi J, Gao GF
PNAS (2023) 120 pp. e2215098120-e2215098120 [ Pubmed: 37094126 DOI: doi:10.1073/pnas.2215098120 ]
- Guide-rna (19 kDa, RNA from Vibrio phage ICP1 2011 A)
- Non-target strand dna (18 kDa, DNA from Vibrio phage ICP1 2011 A)
- Csy2 (29 kDa, Protein from Vibrio phage ICP1 2011 A)
- Target dna bound icp1 csy complex (Complex from Vibrio phage ICP1 2011 A)
- Csy3 (35 kDa, Protein from Vibrio phage ICP1 2011 A)
- Csy1 (22 kDa, Protein from Vibrio phage ICP1 2011 A)
- Target strand dna (18 kDa, DNA from Vibrio phage ICP1 2011 A)
SARS-CoV-2 S trimer with four-antibody cocktail complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7e5s
Q-score: 0.187
Sun Y, Wang L, Feng R, Wang N, Wang Y, Zhu D, Xing X, Yang P, Zhang Y, Li W, Wang X
Cell Res (2021) 31 pp. 597-600 [ Pubmed: 33782529 DOI: doi:10.1038/s41422-021-00497-7 ]
- P17 heavy chain (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Hb27 heavy chain (23 kDa, Protein from Homo sapiens)
- Four-antibody cocktail (Complex)
- P17 light chain (11 kDa, Protein from Homo sapiens)
- H014 heavy chain (23 kDa, Protein from Homo sapiens)
- Fc05 heavy chain (13 kDa, Protein from Homo sapiens)
- Fc05 light chain (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 s trimer (Complex from Homo sapiens)
- H014 light chain (23 kDa, Protein from Homo sapiens)
- Sars-cov-2 s trimer with four-antibody cocktail complex (Complex from Severe acute respiratory syndrome coronavirus 2)
- Hb27 light chain (12 kDa, Protein from Homo sapiens)
Nanometer resolution in situ structure of SARS-CoV-2 post-fusion spike
SARS-CoV-2 S trimer with three-antibody cocktail complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 7e5r
Q-score: 0.24
Sun Y, Wang L, Feng R, Wang N, Wang Y, Zhu D, Xing X, Yang P, Zhang Y, Li W, Wang X
Cell Res (2021) 31 pp. 597-600 [ Pubmed: 33782529 DOI: doi:10.1038/s41422-021-00497-7 ]
- P17 heavy chain (13 kDa, Protein from Homo sapiens)
- Spike glycoprotein (141 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Sars-cov-2 s (Complex from Homo sapiens)
- Antibody (Complex)
- P17 light chain (11 kDa, Protein from Homo sapiens)
- H014 heavy chain (23 kDa, Protein from Homo sapiens)
- Fc05 heavy chain (13 kDa, Protein from Homo sapiens)
- Fc05 light chain (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 s trimer with three-antibody cocktail complex (Complex from Severe acute respiratory syndrome coronavirus 2)
- H014 light chain (23 kDa, Protein from Homo sapiens)
Complex of SARS-CoV-2 spike trimer with its neutralizing antibody HB27
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7cyp
Q-score: 0.345
Zhu L, Deng YQ, Zhang RR, Cui Z, Sun CY, Fan CF, Xing X, Huang W, Chen Q, Zhang NN, Ye Q, Cao TS, Wang N, Wang L, Cao L, Wang H, Kong D, Ma J, Luo C, Zhang Y, Nie J, Sun Y, Lv Z, Shaw N, Li Q, Li XF, Hu J, Xie L, Rao Z, Wang Y, Wang X, Qin CF
Natl Sci Rev (2021) 8 pp. nwaa297-nwaa297 [ DOI: doi:10.1093/nsr/nwaa297 Pubmed: 34676096 ]
- 2-acetamido-2-deoxy-beta-d-glucopyranose (221 Da, Ligand)
- Light chain of hb27 (11 kDa, Protein from Homo sapiens)
- Sars-cov-2 spike glycoprotein (133 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Hb27 antibody (Complex from Homo sapiens)
- Complex of sars-cov-2 spike trimer with its neutralizing antibody hb27 (Complex)
- Sars-cov-2 spike trimer (Complex from Severe acute respiratory syndrome coronavirus 2)
- Heavy chain of hb27 (12 kDa, Protein from Homo sapiens)