Structure of human NuA4/TIP60 complex
Resolution: 9.4 Å
EM Method: Single-particle
Fitted PDBs: 8xvg
Q-score: 0.057
Chen K, Wang L, Yu Z, Yu J, Ren Y, Wang Q, Xu Y
Nat Commun (2024) 15 pp. 7092-7092 [ Pubmed: 39154037 DOI: doi:10.1038/s41467-024-51259-z ]
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
- Isoform 2 of enhancer of polycomb homolog 1 (90 kDa, Protein from Homo sapiens)
- Inositol hexakisphosphate (660 Da, Ligand)
- Actb protein (fragment) (41 kDa, Protein from Homo sapiens)
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Actin-like protein 6a (47 kDa, Protein from Homo sapiens)
- Dna methyltransferase 1-associated protein 1 (53 kDa, Protein from Homo sapiens)
- Isoform 2 of transformation/transcription domain-associated protein (434 kDa, Protein from Homo sapiens)
- Isoform 2 of e1a-binding protein p400 (340 kDa, Protein from Homo sapiens)
- Vacuolar protein sorting-associated protein 72 homolog (40 kDa, Protein from Homo sapiens)
- Structure of human nua4/tip60 complex (Complex from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
The core subcomplex of human NuA4/TIP60 complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8xvt
Q-score: 0.369
Chen K, Wang L, Yu Z, Yu J, Ren Y, Wang Q, Xu Y
Nat Commun (2024) 15 pp. 7092-7092 [ Pubmed: 39154037 DOI: doi:10.1038/s41467-024-51259-z ]
- Ruvb-like 1 (50 kDa, Protein from Homo sapiens)
- Isoform 2 of enhancer of polycomb homolog 1 (90 kDa, Protein from Homo sapiens)
- Actin, cytoplasmic 1 (41 kDa, Protein from Homo sapiens)
- Ruvb-like 2 (51 kDa, Protein from Homo sapiens)
- Actin-like protein 6a (47 kDa, Protein from Homo sapiens)
- Dna methyltransferase 1-associated protein 1 (53 kDa, Protein from Homo sapiens)
- Vacuolar protein sorting-associated protein 72 homolog (40 kDa, Protein from Homo sapiens)
- Isoform 2 of e1a-binding protein p400 (340 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- The core subcomplex of human nua4/tip60 complex (Complex from Homo sapiens)
The TRRAP module of human NuA4/TIP60 complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 8xvv
Q-score: 0.396
Chen K, Wang L, Yu Z, Yu J, Ren Y, Wang Q, Xu Y
Nat Commun (2024) 15 pp. 7092-7092 [ Pubmed: 39154037 DOI: doi:10.1038/s41467-024-51259-z ]
- Inositol hexakisphosphate (660 Da, Ligand)
- The trrap module of human nua4/tip60 complex (Complex from Homo sapiens)
- Isoform 2 of transformation/transcription domain-associated protein (434 kDa, Protein from Homo sapiens)
- Isoform 2 of e1a-binding protein p400 (340 kDa, Protein from Homo sapiens)
The nucleosome-bound human PBAF complex
Resolution: 4.4 Å
EM Method: Single-particle
Fitted PDBs: 7y8r
Q-score: 0.172
Wang L, Yu J, Yu Z, Wang Q, Li W, Ren Y, Chen Z, He S, Xu Y
Nat Commun (2022) 13 pp. 7644-7644 [ Pubmed: 36496390 DOI: doi:10.1038/s41467-022-34859-5 ]
- Bromodomain-containing protein 7 (74 kDa, Protein from Homo sapiens)
- Swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily b member 1 (44 kDa, Protein from Homo sapiens)
- Phd finger protein 10 (56 kDa, Protein from Homo sapiens)
- Swi/snf complex subunit smarcc2 (133 kDa, Protein from Homo sapiens)
- Beryllium trifluoride ion (66 Da, Ligand)
- Swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily d member 1 (58 kDa, Protein from Homo sapiens)
- Unknown (8 kDa, Protein from Homo sapiens)
- Unknown (1 kDa, Protein from Homo sapiens)
- Histone h2b (13 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Dna (213-mer) (65 kDa, DNA from Homo sapiens)
- Histone h2a type 1-c (14 kDa, Protein from Homo sapiens)
- Protein polybromo-1 (184 kDa, Protein from Homo sapiens)
- Actb protein (fragment) (41 kDa, Protein from Homo sapiens)
- At-rich interactive domain-containing protein 2 (197 kDa, Protein from Homo sapiens)
- Unkown (1 kDa, Protein from Homo sapiens)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Histone h3 (15 kDa, Protein from Homo sapiens)
- Unknown (2 kDa, Protein from Homo sapiens)
- Swi/snf-related matrix-associated actin-dependent regulator of chromatin subfamily e member 1 (46 kDa, Protein from Homo sapiens)
- Magnesium ion (24 Da, Ligand)
- Actin-like protein 6a (47 kDa, Protein from Homo sapiens)
- Nucleosome-bound human pbaf complex (Complex from Homo sapiens)
- Unknown (2 kDa, Protein from Homo sapiens)
- Transcription activator brg1 (184 kDa, Protein from Homo sapiens)
- Dna (213-mer) (65 kDa, DNA from Homo sapiens)