Structure of the human outer kinetochore KMN network complex
Resolution: 3.0 Å
EM Method: Single-particle
Fitted PDBs: 8ppr
Q-score: 0.341
Yatskevich S, Yang J, Bellini D, Zhang Z, Barford D
Nat Struct Mol Biol (2024) 31 pp. 874-883 [ Pubmed: 38459127 DOI: doi:10.1038/s41594-024-01249-y ]
- Kinetochore protein spc25 (26 kDa, Protein from Homo sapiens)
- Kinetochore scaffold 1 (265 kDa, Protein from Homo sapiens)
- Protein mis12 homolog (24 kDa, Protein from Homo sapiens)
- Kinetochore-associated protein nsl1 homolog (32 kDa, Protein from Homo sapiens)
- Kinetochore protein spc24 (22 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Kinetochore-associated protein dsn1 homolog (40 kDa, Protein from Homo sapiens)
- Outer kinetochore kmn network junction complex (Complex from Homo sapiens)
- Polyamine-modulated factor 1 (23 kDa, Protein from Homo sapiens)
- Zw10 interactor (31 kDa, Protein from Homo sapiens)
Structure of the human CCAN CENP-A alpha-satellite complex
Resolution: 2.68 Å
EM Method: Single-particle
Fitted PDBs: 7pii
Q-score: 0.573
Yatskevich S, Muir KW, Bellini D, Zhang Z, Yang J, Tischer T, Predin M, Dendooven T, McLaughlin SH, Barford D
Science (2022) 376 pp. 844-852 [ Pubmed: 35420891 DOI: doi:10.1126/science.abn3810 ]
- Histone h2a type 1-c (16 kDa, Protein from Homo sapiens)
- Cenp-a nucleosome in complex with cenp-c (Complex)
- Dna (123-mer) (52 kDa, DNA from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Histone h3-like centromeric protein a (16 kDa, Protein from Homo sapiens)
- Centromere protein c (61 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Dna (122-mer) (52 kDa, DNA from Homo sapiens)
Structure of the human CCAN CENP-A alpha-satellite complex
Resolution: 12.0 Å
EM Method: Single-particle
Fitted PDBs: 7ywx
Q-score: 0.054
Yatskevich S, Muir KW, Bellini D, Zhang Z, Yang J, Tischer T, Predin M, Dendooven T, McLaughlin SH, Barford D
Science (2022) 376 pp. 844-852 [ Pubmed: 35420891 DOI: doi:10.1126/science.abn3810 ]
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
- Centromere protein r (20 kDa, Protein from Homo sapiens)
- Centromere protein i (86 kDa, Protein from Homo sapiens)
- Centromere protein q (30 kDa, Protein from Homo sapiens)
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
- Centromere protein w (10 kDa, Protein from Homo sapiens)
- Centromere protein p (33 kDa, Protein from Homo sapiens)
- Histone h3-like centromeric protein a (16 kDa, Protein from Homo sapiens)
- Centromere protein c (61 kDa, Protein from Homo sapiens)
- Centromere protein x (8 kDa, Protein from Homo sapiens)
- Centromere protein k (31 kDa, Protein from Homo sapiens)
- Centromere protein l (39 kDa, Protein from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Centromere protein u (47 kDa, Protein from Homo sapiens)
- Histone h2a type 1-c (14 kDa, Protein from Homo sapiens)
- Centromere protein t (60 kDa, Protein from Homo sapiens)
- Centromere protein h (28 kDa, Protein from Homo sapiens)
- Centromere protein n (39 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Ccan-cenp-a inner centromere complex (Complex)
- Centromere protein m (19 kDa, Protein from Homo sapiens)
- Centromere protein o (33 kDa, Protein from Homo sapiens)
- Centromere protein s (15 kDa, Protein from Homo sapiens)
Structure of the human CCANdeltaT CENP-A alpha-satellite complex
Resolution: 8.9 Å
EM Method: Single-particle
Fitted PDBs: 7yyh
Q-score: 0.075
Yatskevich S, Muir KW, Bellini D, Zhang Z, Yang J, Tischer T, Predin M, Dendooven T, McLaughlin SH, Barford D
Science (2022) 376 pp. 844-852 [ Pubmed: 35420891 DOI: doi:10.1126/science.abn3810 ]
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
- Centromere protein r (20 kDa, Protein from Homo sapiens)
- Centromere protein i (86 kDa, Protein from Homo sapiens)
- Centromere protein q (30 kDa, Protein from Homo sapiens)
- Histone h3-like centromeric protein a (16 kDa, Protein from Homo sapiens)
- Centromere protein p (33 kDa, Protein from Homo sapiens)
- Centromere protein c (61 kDa, Protein from Homo sapiens)
- Centromere protein k (31 kDa, Protein from Homo sapiens)
- Centromere protein l (39 kDa, Protein from Homo sapiens)
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Centromere protein u (47 kDa, Protein from Homo sapiens)
- Histone h2a type 1-c (14 kDa, Protein from Homo sapiens)
- Centromere protein h (28 kDa, Protein from Homo sapiens)
- Centromere protein n (39 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Ccan-cenp-a inner centromere complex (Complex)
- Centromere protein m (19 kDa, Protein from Homo sapiens)
- Centromere protein o (33 kDa, Protein from Homo sapiens)
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
Structure of the human CCAN deltaCT complex
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7pkn
Q-score: 0.319
Yatskevich S, Muir KW, Bellini D, Zhang Z, Yang J, Tischer T, Predin M, Dendooven T, McLaughlin SH, Barford D
Science (2022) 376 pp. 844-852 [ Pubmed: 35420891 DOI: doi:10.1126/science.abn3810 ]
- Centromere protein k (31 kDa, Protein from Homo sapiens)
- Human inner kinetochore ccan (Complex from Homo sapiens)
- Centromere protein l (39 kDa, Protein from Homo sapiens)
- Water (18 Da, Ligand)
- Centromere protein h (28 kDa, Protein from Homo sapiens)
- Centromere protein n (39 kDa, Protein from Homo sapiens)
- Centromere protein p (33 kDa, Protein from Homo sapiens)
- Centromere protein m (19 kDa, Protein from Homo sapiens)
- Centromere protein o (33 kDa, Protein from Homo sapiens)
- Centromere protein r (20 kDa, Protein from Homo sapiens)
- Centromere protein i (86 kDa, Protein from Homo sapiens)
- Centromere protein q (30 kDa, Protein from Homo sapiens)
- Centromere protein u (47 kDa, Protein from Homo sapiens)
Structure of the human CCAN CENP-A alpha-satellite complex
Resolution: 2.44 Å
EM Method: Single-particle
Fitted PDBs: 7r5r
Q-score: 0.571
Yatskevich S, Muir KW, Bellini D, Zhang Z, Yang J, Tischer T, Predin M, Dendooven T, McLaughlin SH, Barford D
Science (2022) 376 pp. 844-852 [ Pubmed: 35420891 DOI: doi:10.1126/science.abn3810 ]
- Histone h2b type 1-c/e/f/g/i (13 kDa, Protein from Homo sapiens)
- Histone h3-like centromeric protein a (16 kDa, Protein from Homo sapiens)
- Histone h4 (11 kDa, Protein from Homo sapiens)
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
- Human ccan complex with bound alpha-satellite dna (Complex)
- Centromere protein c (61 kDa, Protein from Homo sapiens)
- Histone h2a type 1-c (14 kDa, Protein from Homo sapiens)
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
Structure of the human CCAN bound to alpha satellite DNA
Resolution: 2.83 Å
EM Method: Single-particle
Fitted PDBs: 7r5s
Q-score: 0.465
Yatskevich S, Muir KW, Bellini D, Zhang Z, Yang J, Tischer T, Predin M, Dendooven T, McLaughlin SH, Barford D
Science (2022) 376 pp. 844-852 [ Pubmed: 35420891 DOI: doi:10.1126/science.abn3810 ]
- Dna (66-mer) (16 kDa, DNA from Homo sapiens)
- Centromere protein r (20 kDa, Protein from Homo sapiens)
- Centromere protein i (86 kDa, Protein from Homo sapiens)
- Centromere protein q (30 kDa, Protein from Homo sapiens)
- Centromere protein w (10 kDa, Protein from Homo sapiens)
- Dna (66-mer) (16 kDa, DNA from Homo sapiens)
- Water (18 Da, Ligand)
- Centromere protein p (33 kDa, Protein from Homo sapiens)
- Centromere protein x (8 kDa, Protein from Homo sapiens)
- Centromere protein k (31 kDa, Protein from Homo sapiens)
- Centromere protein l (39 kDa, Protein from Homo sapiens)
- Centromere protein u (47 kDa, Protein from Homo sapiens)
- Centromere protein t (60 kDa, Protein from Homo sapiens)
- Centromere protein h (28 kDa, Protein from Homo sapiens)
- Centromere protein n (39 kDa, Protein from Homo sapiens)
- Centromere protein m (19 kDa, Protein from Homo sapiens)
- Human ccan complex with bound alpha-satellite dna (Complex)
- Centromere protein o (33 kDa, Protein from Homo sapiens)
- Centromere protein s (15 kDa, Protein from Homo sapiens)
Structure of the human CCAN CENP-A alpha-satellite complex
Resolution: 4.55 Å
EM Method: Single-particle
Fitted PDBs: 7r5v
Q-score: 0.238
Yatskevich S, Muir KW, Bellini D, Zhang Z, Yang J, Tischer T, Predin M, Dendooven T, McLaughlin SH, Barford D
Science (2022) 376 pp. 844-852 [ Pubmed: 35420891 DOI: doi:10.1126/science.abn3810 ]
- Centromere protein k (31 kDa, Protein from Homo sapiens)
- Centromere protein l (39 kDa, Protein from Homo sapiens)
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
- Centromere protein h (28 kDa, Protein from Homo sapiens)
- Centromere protein n (39 kDa, Protein from Homo sapiens)
- Centromere protein p (33 kDa, Protein from Homo sapiens)
- Ccan-cenp-a inner centromere complex (Complex)
- Dna (171-mer) (52 kDa, DNA from Homo sapiens)
- Centromere protein m (19 kDa, Protein from Homo sapiens)
- Centromere protein o (33 kDa, Protein from Homo sapiens)
- Centromere protein r (20 kDa, Protein from Homo sapiens)
- Centromere protein i (86 kDa, Protein from Homo sapiens)
- Centromere protein q (30 kDa, Protein from Homo sapiens)
- Centromere protein u (47 kDa, Protein from Homo sapiens)