Cryo-EM structure of human DELE1 in oligomeric form
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8d9x
Q-score: 0.326
Yang J, Baron KR, Pride DE, Schneemann A, Guo X, Chen W, Song AS, Aviles G, Kampmann M, Luke Wiseman R, Lander GC
Nat Struct Mol Biol (2023) 30 pp. 1295-1302 [ DOI: doi:10.1038/s41594-023-01061-0 Pubmed: 37550454 ]
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1)
Resolution: 2.91 Å
EM Method: Single-particle
Fitted PDBs: 7wac
Q-score: 0.459
Miyakawa T, Yang J, Kawasaki M, Adachi N, Fujii A, Miyauchi Y, Muramatsu T, Moriya T, Senda T, Tanokura M
Nat Commun (2022) 13 pp. 5097-5097 [ Pubmed: 36042318 DOI: doi:10.1038/s41467-022-32834-8 ]
- Cyanophycin synthase (99 kDa, Protein from Trichodesmium erythraeum IMS101)
- Tecpha1 (400 kDa, Complex from Trichodesmium erythraeum IMS101)
Trichodesmium erythraeum cyanophycin synthetase 1 (TeCphA1) with ATPgammaS
Resolution: 2.96 Å
EM Method: Single-particle
Fitted PDBs: 7wad
Q-score: 0.475
Miyakawa T, Yang J, Kawasaki M, Adachi N, Fujii A, Miyauchi Y, Muramatsu T, Moriya T, Senda T, Tanokura M
Nat Commun (2022) 13 pp. 5097-5097 [ Pubmed: 36042318 DOI: doi:10.1038/s41467-022-32834-8 ]
- Tecpha1 with atpgammas (400 kDa, Complex from Trichodesmium erythraeum IMS101)
- Phosphothiophosphoric acid-adenylate ester (523 Da, Ligand)
- Magnesium ion (24 Da, Ligand)
- Cyanophycin synthase (99 kDa, Protein from Trichodesmium erythraeum IMS101)
Yeast Lon (PIM1) with endogenous substrate
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7sxo
Q-score: 0.471
Yang J, Song AS, Wiseman RL, Lander GC
J Biol Chem (2022) 298 pp. 101694-101694 [ Pubmed: 35143841 DOI: doi:10.1016/j.jbc.2022.101694 ]
- Lon protease homolog, mitochondrial (108 kDa, Protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
- Magnesium ion (24 Da, Ligand)
- Adenosine-5'-diphosphate (427 Da, Ligand)
- Adenosine-5'-triphosphate (507 Da, Ligand)
- Cryo-em structure of yeast lon (pim1) in complex with endogenous substrate (Complex from Saccharomyces cerevisiae)
- Endogenous substrate (1 kDa, Protein from Escherichia coli)
Zika virus complexed with a neutralizing antibody Z23-Fab
Resolution: 9.4 Å
EM Method: Single-particle
Fitted PDBs: 5gzr
Q-score: 0.102
Wang Q, Yang H, Liu X, Dai L, Ma T, Qi J, Wong G, Peng R, Liu S, Li J, Li S, Song J, Liu J, He J, Yuan H, Xiong Y, Liao Y, Li J, Yang J, Tong Z, Griffin BD, Bi Y, Liang M, Xu X, Qin C, Cheng G, Zhang X, Wang P, Qiu X, Kobinger G, Shi Y, Yan J, Gao GF
Sci Transl Med (2016) 8 pp. 369ra179-369ra179 [ DOI: doi:10.1126/scitranslmed.aai8336 Pubmed: 27974667 ]
- Strutural protein m (8 kDa, Protein from Zika virus)
- Structural protein e (54 kDa, Protein from Zika virus)
- Zika virus in complex with a neutralizing antibody z23 fab (Complex)
- Z23 fab heavy chain (23 kDa, Protein from Homo sapiens)
- Zika virus (Complex from Zika virus)
- Z23 fab light chain (23 kDa, Protein from Homo sapiens)
- Neutralizing antibody z23 fab (Complex)