Structure of Wild-type PSI monomer1 from Cyanophora paradoxa
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 7dr0
Q-score: 0.53
Kato K, Nagao R, Ueno Y, Yokono M, Suzuki T, Jiang TY, Dohmae N, Akita F, Akimoto S, Miyazaki N, Shen JR
bioRxiv (2022) [ DOI: doi:10.1101/2022.01.03.474851 ]
- Beta-carotene (536 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit xi (15 kDa, Protein from Cyanophora paradoxa)
- Psi monomer1 (350 kDa, Complex from Cyanophora paradoxa)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Cyanophora paradoxa)
- Phylloquinone (450 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit ii, cyanelle (23 kDa, Protein from Cyanophora paradoxa)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i reaction center subunit psak 1 (15 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit iv (8 kDa, Protein from Cyanophora paradoxa)
- Iron/sulfur cluster (351 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Cyanophora paradoxa)
- Photosystem i iron-sulfur center (8 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Cyanophora paradoxa)
- Chlorophyll a isomer (893 Da, Ligand)
Structure of Wild-type PSI monomer2 from Cyanophora paradoxa
Resolution: 3.2 Å
EM Method: Single-particle
Fitted PDBs: 7dr1
Q-score: 0.525
Kato K, Nagao R, Ueno Y, Yokono M, Suzuki T, Jiang TY, Dohmae N, Akita F, Akimoto S, Miyazaki N, Shen JR
bioRxiv (2022) [ DOI: doi:10.1101/2022.01.03.474851 ]
- Photosystem i reaction center subunit iv (8 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit xi (15 kDa, Protein from Cyanophora paradoxa)
- Iron/sulfur cluster (351 Da, Ligand)
- Beta-carotene (536 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Phylloquinone (450 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Cyanophora paradoxa)
- Psi monomer2 (350 kDa, Complex from Cyanophora paradoxa)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Photosystem i iron-sulfur center (8 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Cyanophora paradoxa)
- Chlorophyll a isomer (893 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit ii, cyanelle (23 kDa, Protein from Cyanophora paradoxa)
- Chlorophyll a (893 Da, Ligand)
Structure of GraFix PSI tetramer from Cyanophora paradoxa
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 7dr2
Q-score: 0.374
Kato K, Nagao R, Ueno Y, Yokono M, Suzuki T, Jiang TY, Dohmae N, Akita F, Akimoto S, Miyazaki N, Shen JR
bioRxiv (2022) [ DOI: doi:10.1101/2022.01.03.474851 ]
- Beta-carotene (536 Da, Ligand)
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Photosystem i reaction center subunit viii (3 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit xi (15 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit xii (3 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit ix (4 kDa, Protein from Cyanophora paradoxa)
- Phylloquinone (450 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Cyanophora paradoxa)
- Psi tetramer (1 MDa, Complex from Cyanophora paradoxa)
- Photosystem i reaction center subunit ii, cyanelle (23 kDa, Protein from Cyanophora paradoxa)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i reaction center subunit psak 1 (15 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit iv (8 kDa, Protein from Cyanophora paradoxa)
- Iron/sulfur cluster (351 Da, Ligand)
- Photosystem i p700 chlorophyll a apoprotein a2 (82 kDa, Protein from Cyanophora paradoxa)
- Photosystem i iron-sulfur center (8 kDa, Protein from Cyanophora paradoxa)
- Photosystem i reaction center subunit iii (20 kDa, Protein from Cyanophora paradoxa)
- Chlorophyll a isomer (893 Da, Ligand)
Structure of PSI tetramer from Anabaena
Resolution: 3.3 Å
EM Method: Single-particle
Fitted PDBs: 6jeo
Q-score: 0.516
Kato K, Nagao R, Jiang TY, Ueno Y, Yokono M, Chan SK, Watanabe M, Ikeuchi M, Shen JR, Akimoto S, Miyazaki N, Akita F
Nat Commun (2019) 10 pp. 4929-4929 [ DOI: doi:10.1038/s41467-019-12942-8 Pubmed: 31666526 ]
- Photosystem i p700 chlorophyll a apoprotein a2 1 (83 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Beta-carotene (536 Da, Ligand)
- 1,2-dipalmitoyl-phosphatidyl-glycerole (722 Da, Ligand)
- Iron/sulfur cluster (351 Da, Ligand)
- Psi tetramer (1 MDa, Complex from Nostoc sp. PCC 7120)
- Photosystem i reaction center subunit psak 1 (8 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Photosystem i reaction center subunit xii (4 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Photosystem i reaction center subunit ix (5 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Photosystem i iron-sulfur center (8 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Photosystem i p700 chlorophyll a apoprotein a1 (83 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Photosystem i 4.8 kda protein (4 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Phylloquinone (450 Da, Ligand)
- Photosystem i reaction center subunit iv (7 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Photosystem i reaction center subunit viii (5 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- 1,2-distearoyl-monogalactosyl-diglyceride (787 Da, Ligand)
- Chlorophyll a (893 Da, Ligand)
- Photosystem i reaction center subunit ii (15 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Photosystem i reaction center subunit xi (18 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))
- Chlorophyll a isomer (893 Da, Ligand)
- Photosystem i reaction center subunit iii (17 kDa, Protein from Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576))