Cryo-EM structure of the PYD filament of AIM2
Resolution: 5.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 6mb2
Q-score: 0.083
Lu A, Li Y, Yin Q, Ruan J, Yu X, Egelman E, Wu H
Cell Discov (2015) 1 [ Pubmed: 26583071 DOI: doi:10.1038/celldisc.2015.13 ]
- Interferon-inducible protein aim2 (10 kDa, Protein from Homo sapiens)
- Pyd of aim2 (Cellular component from Homo sapiens)
- Green fluorescent protein (25 kDa, Protein from Aequorea victoria)
Cryo-EM structure of the MAL TIR domain filament
Resolution: 7.0 Å
EM Method: Helical reconstruction
Fitted PDBs: 5uzb
Q-score: 0.149
Ve T, Vajjhala PR, Hedger A, Croll T, DiMaio F, Horsefield S, Yu X, Lavrencic P, Hassan Z, Morgan GP, Mansell A, Mobli M, O'Carroll A, Chauvin B, Gambin Y, Sierecki E, Landsberg MJ, Stacey KJ, Egelman EH, Kobe B
Nat Struct Mol Biol (2017) 24 pp. 743-751 [ DOI: doi:10.1038/nsmb.3444 Pubmed: 28759049 ]
An envelope of a filamentous hyperthermophilic virus carries lipids in a horseshoe conformation
Resolution: 4.5 Å
EM Method: Helical reconstruction
Fitted PDBs: 5w7g
Q-score: 0.198
Egelman EH, Kasson PM, DiMaio F, Yu X, Lucas-Staat S, Krupovic M, Schouten S, Prangishvili D
eLife (2017) 6 [ Pubmed: 28639939 DOI: doi:10.7554/eLife.26268 ]
- Acidianus filamentous virus 1 (Virus from Acidianus filamentous virus 1)
- Dna (253-mer) (77 kDa, DNA from Acidianus filamentous virus 1)
- Orf132 (15 kDa, Protein from Acidianus filamentous virus 1)
- Orf140 (15 kDa, Protein from Acidianus filamentous virus 1)
The Molecular Basis for Flexibility in the Flexible Filamentous Plant Viruses
Resolution: 5.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 5a2t
Q-score: 0.161
DiMaio F, Chen CC, Yu X, Frenz B, Hsu YH, Lin NS, Egelman EH
Nat Struct Mol Biol (2015) 22 pp. 642-644 [ Pubmed: 26167882 DOI: doi:10.1038/nsmb.3054 ]
A Virus that Infects a Hyperthermophile Encapsidates A-Form DNA
Resolution: 3.8 Å
EM Method: Helical reconstruction
Fitted PDBs: 3j9x
Q-score: 0.296
DiMaio F, Yu X, Rensen E, Krupovic M, Prangishvili D, Egelman EH
Science (2015) 348 pp. 914-917 [ Pubmed: 25999507 DOI: doi:10.1126/science.aaa4181 ]
Helical nanotube formed from a 29-residue peptide
Resolution: 3.6 Å
EM Method: Helical reconstruction
Fitted PDBs: 3j89
Q-score: 0.43
Egelman EH, Xu C, DiMaio F, Magnotti E, Modlin C, Yu X, Wright E, Baker D, Conticello VP
Structure (2015) 23 pp. 280-289 [ DOI: doi:10.1016/j.str.2014.12.008 Pubmed: 25620001 ]
Berke IC, Yu X, Modis Y, Egelman EH
PNAS (2012) 109 pp. 18437-18441 [ Pubmed: 23090998 DOI: doi:10.1073/pnas.1212186109 ]
- Mda5 (Protein from Mus musculus)
- Mda5-dsrna (Sample)
Structure of the CS1 pilus of enterotoxigenic Escherichia coli reveals structural polymorphism
Galkin VE, Kolappan S, Ng D, Zong Z, Li J, Yu X, Egelman EH, Craig L
J Bacteriol (2013) 195 pp. 1360-1370 [ Pubmed: 23175654 DOI: doi:10.1128/JB.01989-12 ]
- Cooa (15 kDa, Cellular component from Escherichia coli)
- Cs1 pilus (Sample)
Structure of the CS1 pilus of enterotoxigenic Escherichia coli reveals structural polymorphism
Galkin VE, Kolappan S, Ng D, Zong Z, Li J, Yu X, Egelman EH, Craig L
J Bacteriol (2013) 195 pp. 1360-1370 [ Pubmed: 23175654 DOI: doi:10.1128/JB.01989-12 ]
- Cooa (15 kDa, Cellular component from Escherichia coli)
- Cs1 pilus (Sample)