Resolution: 2.9 Å
EM Method: Single-particle
Fitted PDBs: 8ppt
Q-score: 0.55
Betancurt-Anzola L, Martinez-Carranza M, Delarue M, Zatopek KM, Gardner AF, Sauguet L
Nat Commun (2023) 14 pp. 8306-8306 [ DOI: doi:10.1038/s41467-023-44125-x Pubmed: 38097591 ]
- Dna (5'-d(p*ap*gp*cp*ap*cp*gp*gp*cp*tp*cp*gp*gp*cp*cp*cp*gp*g)-3') (7 kDa, DNA from Pyrococcus abyssi GE5)
- Magnesium ion (24 Da, Ligand)
- Dna polymerase ii small subunit (74 kDa, Protein from Pyrococcus abyssi GE5)
- Dna polymerase sliding clamp (29 kDa, Protein from Pyrococcus abyssi GE5)
- Binary complex of pold bound to pcna and a primer/template duplex containing three consecutive mismatches (Complex from Pyrococcus abyssi GE5)
- Dp2 (144 kDa, Protein from Pyrococcus abyssi GE5)
- Zinc ion (65 Da, Ligand)
- Dna (5'-d(p*cp*cp*gp*gp*gp*cp*cp*gp*ap*gp*cp*cp*gp*tp*gp*cp*tp*tp*t)-3') (5 kDa, DNA from Pyrococcus abyssi GE5)
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 8ppu
Q-score: 0.532
Betancurt-Anzola L, Martinez-Carranza M, Delarue M, Zatopek KM, Gardner AF, Sauguet L
Nat Commun (2023) 14 pp. 8306-8306 [ DOI: doi:10.1038/s41467-023-44125-x Pubmed: 38097591 ]
- Magnesium ion (24 Da, Ligand)
- Dna polymerase ii small subunit (74 kDa, Protein from Pyrococcus abyssi GE5)
- Dna polymerase sliding clamp (29 kDa, Protein from Pyrococcus abyssi GE5)
- Binary complex of pold bound to pcna and a primer/template duplex containing three consecutive mismatches (Complex from Pyrococcus abyssi GE5)
- Dp2 (144 kDa, Protein from Pyrococcus abyssi GE5)
- Zinc ion (65 Da, Ligand)
- Dna (5'-d(p*ap*gp*cp*ap*cp*gp*gp*cp*tp*cp*gp*gp*cp*cp*cp*gp*g)-3') (7 kDa, DNA from Pyrococcus abyssi GE5)
- Dna (5'-d(p*cp*cp*gp*gp*gp*cp*cp*gp*ap*gp*cp*cp*gp*tp*(gs)p*(c7r)p*(pst)p*(pst)p*(pst))-3') (6 kDa, DNA from Pyrococcus abyssi GE5)
Resolution: 3.02 Å
EM Method: Single-particle
Fitted PDBs: 8ppv
Q-score: 0.547
Betancurt-Anzola L, Martinez-Carranza M, Delarue M, Zatopek KM, Gardner AF, Sauguet L
Nat Commun (2023) 14 pp. 8306-8306 [ DOI: doi:10.1038/s41467-023-44125-x Pubmed: 38097591 ]
- Magnesium ion (24 Da, Ligand)
- Dna polymerase ii small subunit (74 kDa, Protein from Pyrococcus abyssi GE5)
- Dna (5'-d(*p*cp*cp*gp*gp*gp*cp*cp*gp*ap*gp*cp*cp*gp*tp*(gs)p*(g7p)p*(pst)p*(pst)p*(pst))-3') (6 kDa, DNA from Pyrococcus abyssi GE5)
- Dna polymerase sliding clamp (29 kDa, Protein from Pyrococcus abyssi GE5)
- Binary complex of pold bound to pcna and a primer/template duplex containing three consecutive mismatches (Complex from Pyrococcus abyssi GE5)
- Dp2 (144 kDa, Protein from Pyrococcus abyssi GE5)
- Zinc ion (65 Da, Ligand)
- Dna (5'-d(p*ap*gp*cp*ap*cp*gp*gp*cp*tp*cp*gp*gp*cp*cp*cp*gp*g)-3') (7 kDa, DNA from Pyrococcus abyssi GE5)