Electron Microscopy Data Bank

EMBL

was set up in 1974 as Europe’s flagship laboratory for the life sciences – an intergovernmental organisation with more than 80 independent research groups covering the spectrum of molecular biology:

Develop

new instruments and methods

Integrating

life science research in Europe

More about EMBL

Six sites

represent EMBL in Europe.

Barcelona

Tissue biology and disease modelling

Grenoble

Structural biology

Hamburg

Structural biology

Heidelberg

Main laboratory

Hinxton

EMBL-EBI: European Bioinformatics Institute

Rome

Epigenetics and neurobiology

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EMD-35086

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A cryo-EM structure of KTF1-bound polymerase V transcription elongation complex

Release date: June 21, 2023
Resolution: 4.3 Å
EM Method: Single-particle
Fitted PDBs: 8hyj
Q-score: 0.205

Zhang HW, Huang K, Gu ZX, Wu XX, Wang JW, Zhang Y

Nat Commun (2023) 14 pp. 3118-3118 [ DOI: doi:10.1038/s41467-023-38619-x Pubmed: 37253723 ]

Sample:

Dna (48-mer) (14 kDa, DNA from synthetic construct)
Ktf1-bound polymerase v transcription elongation complex (608 MDa, Complex from Arabidopsis thaliana)
Dna-directed rna polymerase v subunit 1 (218 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases ii, iv and v subunit 11 (13 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases iv and v subunit 2 (132 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerase v subunit 5a (25 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases ii, iv and v subunit 10 (8 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases ii, iv and v subunit 12 (5 kDa, Protein from Arabidopsis thaliana)
Protein rna-directed dna methylation 3 (158 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases ii, iv and v subunit 6a (16 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases iv and v subunit 3b (35 kDa, Protein from Arabidopsis thaliana)
Rna (30-mer) (9 kDa, RNA from synthetic construct)
Dna-directed rna polymerase v subunit 7 (20 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases ii and v subunit 8a (16 kDa, Protein from Arabidopsis thaliana)
Magnesium ion (24 Da, Ligand)
Dna-directed rna polymerases ii, iv and v subunit 9a (13 kDa, Protein from Arabidopsis thaliana)
Dna-directed rna polymerases iv and v subunit 4 (22 kDa, Protein from Arabidopsis thaliana)
Zinc ion (65 Da, Ligand)
Dna (48-mer) (14 kDa, DNA from synthetic construct)

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