BA.2.86 RBD protein in complex with ACE2.
Resolution: 3.29 Å
EM Method: Single-particle
Fitted PDBs: 8yzb
Q-score: 0.477
Liu Y, Zhao X, Shi J, Wang Y, Liu H, Hu YF, Hu B, Shuai H, Yuen TT, Chai Y, Liu F, Gong HR, Li J, Wang X, Jiang S, Zhang X, Zhang Y, Li X, Wang L, Hartnoll M, Zhu T, Hou Y, Huang X, Yoon C, Wang Y, He Y, Zhou M, Du L, Zhang X, Chan WM, Chen LL, Cai JP, Yuan S, Zhou J, Huang JD, Yuen KY, To KK, Chan JF, Zhang BZ, Sun L, Wang P, Chu H
Nat Commun (2024) 15 pp. 8728-8728 [ DOI: doi:10.1038/s41467-024-53033-7 Pubmed: 39379369 ]
- Angiotensin-converting enzyme 2 (85 kDa, Protein from Homo sapiens)
- Ba.2.86 rbd protein in complex with ace2 (Complex from Homo sapiens)
- Spike glycoprotein,fibritin,fusion protein (142 kDa, Protein from synthetic construct)
Structure of BA.2.86 spike protein in complex with ACE2.
Resolution: 2.7 Å
EM Method: Single-particle
Fitted PDBs: 8yzc
Q-score: 0.267
Liu Y, Zhao X, Shi J, Wang Y, Liu H, Hu YF, Hu B, Shuai H, Yuen TT, Chai Y, Liu F, Gong HR, Li J, Wang X, Jiang S, Zhang X, Zhang Y, Li X, Wang L, Hartnoll M, Zhu T, Hou Y, Huang X, Yoon C, Wang Y, He Y, Zhou M, Du L, Zhang X, Chan WM, Chen LL, Cai JP, Yuan S, Zhou J, Huang JD, Yuen KY, To KK, Chan JF, Zhang BZ, Sun L, Wang P, Chu H
Nat Commun (2024) 15 pp. 8728-8728 [ DOI: doi:10.1038/s41467-024-53033-7 Pubmed: 39379369 ]
Structure of JN.1 RBD protein in complex with ACE2.
Resolution: 3.07 Å
EM Method: Single-particle
Fitted PDBs: 8yzd
Q-score: 0.573
Liu Y, Zhao X, Shi J, Wang Y, Liu H, Hu YF, Hu B, Shuai H, Yuen TT, Chai Y, Liu F, Gong HR, Li J, Wang X, Jiang S, Zhang X, Zhang Y, Li X, Wang L, Hartnoll M, Zhu T, Hou Y, Huang X, Yoon C, Wang Y, He Y, Zhou M, Du L, Zhang X, Chan WM, Chen LL, Cai JP, Yuan S, Zhou J, Huang JD, Yuen KY, To KK, Chan JF, Zhang BZ, Sun L, Wang P, Chu H
Nat Commun (2024) 15 pp. 8728-8728 [ DOI: doi:10.1038/s41467-024-53033-7 Pubmed: 39379369 ]
The JN.1 spike protein (S) in complex with ACE2.
Resolution: 3.06 Å
EM Method: Single-particle
Fitted PDBs: 8yze
Q-score: 0.25
Liu Y, Zhao X, Shi J, Wang Y, Liu H, Hu YF, Hu B, Shuai H, Yuen TT, Chai Y, Liu F, Gong HR, Li J, Wang X, Jiang S, Zhang X, Zhang Y, Li X, Wang L, Hartnoll M, Zhu T, Hou Y, Huang X, Yoon C, Wang Y, He Y, Zhou M, Du L, Zhang X, Chan WM, Chen LL, Cai JP, Yuan S, Zhou J, Huang JD, Yuen KY, To KK, Chan JF, Zhang BZ, Sun L, Wang P, Chu H
Nat Commun (2024) 15 pp. 8728-8728 [ DOI: doi:10.1038/s41467-024-53033-7 Pubmed: 39379369 ]
Omicron spike variant BA.1 with Bn03
Resolution: 3.81 Å
EM Method: Single-particle
Fitted PDBs: 8i4h
Q-score: 0.201
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ DOI: doi:10.1038/s41392-023-01534-0 Pubmed: 37422451 ]
- Omicron ba.1 spike with bn03 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (142 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bn03 (27 kDa, Protein from Homo sapiens)
- Ba.1 (Complex from Homo sapiens)
- Bn03 (Complex)
Omicron spike variant XBB with Bn03
Resolution: 3.98 Å
EM Method: Single-particle
Fitted PDBs: 8i4e
Q-score: 0.181
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ DOI: doi:10.1038/s41392-023-01534-0 Pubmed: 37422451 ]
- Xbb (Complex from Homo sapiens)
- Bn03 (Complex)
- Spike glycoprotein (143 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bn03 (27 kDa, Protein from Homo sapiens)
- Omicron spike with 6m6 (Complex from Severe acute respiratory syndrome coronavirus 2)
Omicron spike variant XBB with n3130v-Fc
Resolution: 3.44 Å
EM Method: Single-particle
Fitted PDBs: 8i4f
Q-score: 0.302
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ Pubmed: 37422451 DOI: doi:10.1038/s41392-023-01534-0 ]
- Omicron spike with 6m6 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (143 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- N3130v-fc (42 kDa, Protein from Homo sapiens)
- Xbb (Complex from Homo sapiens)
- Bn03 (Complex)
Omicron spike variant BQ.1.1 with n3130v-Fc
Resolution: 3.68 Å
EM Method: Single-particle
Fitted PDBs: 8i4g
Q-score: 0.266
Hao A, Song W, Li C, Zhang X, Tu C, Wang X, Wang P, Wu Y, Ying T, Sun L
Signal Transduct Target Ther (2023) 8 pp. 269-269 [ Pubmed: 37422451 DOI: doi:10.1038/s41392-023-01534-0 ]
- Omicron spike with 6m6 (Complex from Severe acute respiratory syndrome coronavirus 2)
- Spike glycoprotein (143 kDa, Protein from Severe acute respiratory syndrome coronavirus 2)
- Bq.1.1 (Complex from Homo sapiens)
- N3130v-fc (Complex)
- N3130v-fc (42 kDa, Protein from Homo sapiens)
AK-42 inhibitor binding human ClC-2 TMD
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 8gqu
Q-score: 0.377
Ma T, Wang L, Chai A, Liu C, Cui W, Yuan S, Wing Ngor Au S, Sun L, Zhang X, Zhang Z, Lu J, Gao Y, Wang P, Li Z, Liang Y, Vogel H, Wang YT, Wang D, Yan K, Zhang H
Nat Commun (2023) 14 pp. 3424-3424 [ Pubmed: 37296152 DOI: doi:10.1038/s41467-023-39218-6 ]
- 2-[[2,6-bis(chloranyl)-3-phenylmethoxy-phenyl]amino]pyridine-3-carboxylic acid (389 Da, Ligand)
- Chloride channel protein 2 (98 kDa, Protein from Homo sapiens)
- Ak-42 inhibitor binding human clc-2 tmd 3.5a (180 MDa, Complex from Homo sapiens)
TMD masked refine map of human ClC-2
Resolution: 3.5 Å
EM Method: Single-particle
Fitted PDBs: 7xja
Q-score: 0.372
Ma T, Wang L, Chai A, Liu C, Cui W, Yuan S, Wing Ngor Au S, Sun L, Zhang X, Zhang Z, Lu J, Gao Y, Wang P, Li Z, Liang Y, Vogel H, Wang YT, Wang D, Yan K, Zhang H
Nat Commun (2023) 14 pp. 3424- [ DOI: doi:10.1038/s41467-023-39218-6 ]
- Chloride channel protein 2 (98 kDa, Protein from Homo sapiens)
- Full length human clc-2 homo dimer (180 MDa, Complex from Homo sapiens)