Resolution: 4.176 Å
EM Method: Single-particle
Fitted PDBs: 7ymd
Q-score: 0.319
Li Q, Zhang J, Haluska C, Zhang X, Wang L, Liu G, Wang Z, Jin D, Cheng T, Wang H, Tian Y, Wang X, Sun L, Zhao X, Chen Z, Wang L
Nat Struct Mol Biol (2024) [ Pubmed: 38890552 DOI: doi:10.1038/s41594-024-01319-1 ]
- Cryo-em structure of nse1/3/4 (Complex from Saccharomyces cerevisiae S288c)
- Non-structural maintenance of chromosome element 3 (34 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosome element 4 (46 kDa, Protein from Saccharomyces cerevisiae S288C)
- Non-structural maintenance of chromosomes element 1 (38 kDa, Protein from Saccharomyces cerevisiae S288C)
Resolution: 4.31 Å
EM Method: Single-particle
Fitted PDBs: 8i8b
Q-score: 0.293
Jia X, Gao Y, Huang Y, Sun L, Li S, Li H, Zhang X, Li Y, He J, Wu W, Venkannagari H, Yang K, Baker ML, Zhang Q
Nat Commun (2023) 14 pp. 7481-7481 [ DOI: doi:10.1038/s41467-023-43284-1 Pubmed: 37980340 ]
- 38k (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Acorf-109 peptide (44 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Viral capsid associated protein (79 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- P40 (41 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Early 49 daa protein (55 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Autographa californica multiple nucleopolyhedrovirus (Virus from Autographa californica multiple nucleopolyhedrovirus)
- Major viral capsid protein (38 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Occlusion-derived virus envelope/capsid protein (33 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
Plug structure of the Autographa californica multiple nucleopolyhedrovirus (AcMNPV)
Resolution: 4.93 Å
EM Method: Single-particle
Fitted PDBs: 8i8c
Q-score: 0.173
Jia X, Gao Y, Huang Y, Sun L, Li S, Li H, Zhang X, Li Y, He J, Wu W, Venkannagari H, Yang K, Baker ML, Zhang Q
Nat Commun (2023) 14 pp. 7481-7481 [ DOI: doi:10.1038/s41467-023-43284-1 Pubmed: 37980340 ]
- Occlusion-derived virus envelope/capsid protein (33 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
- Autographa californica multiple nucleopolyhedrovirus (Virus from Autographa californica multiple nucleopolyhedrovirus)
- P40 (41 kDa, Protein from Autographa californica multiple nucleopolyhedrovirus)
Cryo-EM Structure of the KBTBD2-CUL3-Rbx1-p85a dimeric complex
Resolution: 4.6 Å
EM Method: Single-particle
Fitted PDBs: 8h36
Q-score: 0.068
Hu Y, Zhang Z, Mao Q, Zhang X, Hao A, Xun Y, Wang Y, Han L, Zhan W, Liu Q, Yin Y, Peng C, Moresco EMY, Chen Z, Beutler B, Sun L
Nat Struct Mol Biol (2024) 31 pp. 336-350 [ DOI: doi:10.1038/s41594-023-01182-6 Pubmed: 38332366 ]
- Kelch repeat and btb domain-containing protein 2 (71 kDa, Protein from Homo sapiens)
- Kbtbd2-cul3-rbx1-p85a dimeric complex (Complex from Homo sapiens)
- Phosphatidylinositol 3-kinase regulatory subunit alpha (83 kDa, Protein from Homo sapiens)
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Cullin-3 (89 kDa, Protein from Homo sapiens)
Cryo-EM Structure of the KBTBD2-CRL3~N8-CSN(mutate) complex
Resolution: 4.25 Å
EM Method: Single-particle
Fitted PDBs: 8h38
Q-score: 0.078
Hu Y, Zhang Z, Mao Q, Zhang X, Hao A, Xun Y, Wang Y, Han L, Zhan W, Liu Q, Yin Y, Peng C, Moresco EMY, Chen Z, Beutler B, Sun L
Nat Struct Mol Biol (2024) 31 pp. 336-350 [ Pubmed: 38332366 DOI: doi:10.1038/s41594-023-01182-6 ]
- Cop9 signalosome complex subunit 3 (47 kDa, Protein from Homo sapiens)
- Cop9 signalosome complex subunit 6 (36 kDa, Protein from Homo sapiens)
- Kelch repeat and btb domain-containing protein 2 (71 kDa, Protein from Homo sapiens)
- Cop9 signalosome complex subunit 5 (37 kDa, Protein from Homo sapiens)
- Csn (Complex)
- Cullin-3 (89 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Cop9 signalosome complex subunit 1 (59 kDa, Protein from Homo sapiens)
- Nedd8 (8 kDa, Protein from Homo sapiens)
- Cop9 signalosome complex subunit 4 (46 kDa, Protein from Homo sapiens)
- Cop9 signalosome complex subunit 7b (29 kDa, Protein from Homo sapiens)
- Nedd8 (Complex)
- Cop9 signalosome complex subunit 8 (23 kDa, Protein from Homo sapiens)
- Cop9 signalosome complex subunit 2 (51 kDa, Protein from Homo sapiens)
- E3 ubiquitin-protein ligase rbx1 (12 kDa, Protein from Homo sapiens)
- Kbtbd2-crl3~n8 dimer assemble with csn(mutate) monomer (Complex from Homo sapiens)
- Csn subunit1, kbtbd2, cullin-3, rbx1 (Complex)
local refinement of CSN1/2/4/5/6-CRL3/CTD-N8: KBTBD2-CRL3-CSN(mutate) complex