Cryo-EM structure of a Zinc-loaded wild-type YiiP-Fab complex
Resolution: 3.8 Å
EM Method: Single-particle
Fitted PDBs: 8f6e
Q-score: 0.412
Hussein A, Fan S, Lopez-Redondo M, Kenney I, Zhang X, Beckstein O, Stokes DL
eLife (2023) 12 [ Pubmed: 37906094 DOI: doi:10.7554/eLife.87167 ]
- Fab light chain (23 kDa, Protein from Homo sapiens)
- Wild-type zinc-loaded yiip-fab complex (163 kDa, Complex from Shewanella oneidensis)
- Fab heavy chain (25 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
- Cadmium and zinc efflux pump fief (32 kDa, Protein from Shewanella oneidensis)
Cryo-EM structure of a Zinc-loaded D51A mutant of the YiiP-Fab complex
Resolution: 3.6 Å
EM Method: Single-particle
Fitted PDBs: 8f6f
Q-score: 0.448
Hussein A, Fan S, Lopez-Redondo M, Kenney I, Zhang X, Beckstein O, Stokes DL
eLife (2023) 12 [ Pubmed: 37906094 DOI: doi:10.7554/eLife.87167 ]
- D51a zinc-loaded yiip-fab complex (163 kDa, Complex from Shewanella oneidensis)
- Fab2r heavy chain (25 kDa, Protein from Homo sapiens)
- Cadmium and zinc efflux pump fief (32 kDa, Protein from Shewanella oneidensis)
- Fab2r light chain (23 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of a Zinc-loaded asymmetrical TMD D70A mutant of the YiiP-Fab complex
Resolution: 3.9 Å
EM Method: Single-particle
Fitted PDBs: 8f6h
Q-score: 0.419
Hussein A, Fan S, Lopez-Redondo M, Kenney I, Zhang X, Beckstein O, Stokes DL
eLife (2023) 12 [ Pubmed: 37906094 DOI: doi:10.7554/eLife.87167 ]
- Cadmium and zinc efflux pump fief (32 kDa, Protein from Shewanella oneidensis MR-1)
- Fab2r heavy chain (25 kDa, Protein from Homo sapiens)
- D70a asymmetrical zinc-loaded yiip-fab complex (163 kDa, Complex from Shewanella oneidensis)
- Fab2r light chain (23 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of a Zinc-loaded symmetrical D70A mutant of the YiiP-Fab complex
Resolution: 4.03 Å
EM Method: Single-particle
Fitted PDBs: 8f6i
Q-score: 0.388
Hussein A, Fan S, Lopez-Redondo M, Kenney I, Zhang X, Beckstein O, Stokes DL
eLife (2023) 12 [ Pubmed: 37906094 DOI: doi:10.7554/eLife.87167 ]
- Cadmium and zinc efflux pump fief (32 kDa, Protein from Shewanella oneidensis MR-1)
- Fab2r heavy chain (25 kDa, Protein from Homo sapiens)
- D70a symmetrical zinc-loaded yiip-fab complex (163 kDa, Complex from Shewanella oneidensis)
- Fab2r light chain (23 kDa, Protein from Homo sapiens)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of a Zinc-loaded D287A mutant of the YiiP-Fab complex
Resolution: 3.7 Å
EM Method: Single-particle
Fitted PDBs: 8f6j
Q-score: 0.408
Hussein A, Fan S, Lopez-Redondo M, Kenney I, Zhang X, Beckstein O, Stokes DL
eLife (2023) 12 [ Pubmed: 37906094 DOI: doi:10.7554/eLife.87167 ]
- D287a zinc-loaded yiip-fab complex (163 kDa, Complex from Shewanella oneidensis)
- Fab2r heavy chain (25 kDa, Protein from Homo sapiens)
- Fab2r light chain (23 kDa, Protein from Homo sapiens)
- Cadmium and zinc efflux pump fief (32 kDa, Protein from Shewanella oneidensis)
- Zinc ion (65 Da, Ligand)
Cryo-EM structure of a Zinc-loaded H263A/D287A mutant of the YiiP-Fab complex
Resolution: 3.46 Å
EM Method: Single-particle
Fitted PDBs: 8f6k
Q-score: 0.433
Hussein A, Fan S, Lopez-Redondo M, Kenney I, Zhang X, Beckstein O, Stokes DL
eLife (2023) 12 [ Pubmed: 37906094 DOI: doi:10.7554/eLife.87167 ]
- Cadmium and zinc efflux pump fief (32 kDa, Protein from Shewanella oneidensis)
- D287a_h263a zinc-loaded yiip-fab complex (325 kDa, Complex from Shewanella oneidensis)
- Zinc ion (65 Da, Ligand)
Cryo-EM Structure of KdpFABC in E1 state
Sweet ME, Larsen C, Zhang X, Schlame M, Pedersen BP, Stokes DL
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2105195118 Pubmed: 34272288 ]
- Potassium-transporting atpase kdpc subunit (Protein from Escherichia coli K-12)
- Kdpfabc in e1 apo state (160 kDa, Complex from Escherichia coli K-12)
- Potassium-transporting atpase atp-binding subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase kdpf subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase potassium-binding subunit (Protein from Escherichia coli K-12)
Cryo-EM Structure of KdpFABC in E2Pi state with AlF4
Sweet ME, Larsen C, Zhang X, Schlame M, Pedersen BP, Stokes DL
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2105195118 Pubmed: 34272288 ]
- Kdpfabc in e2pi state with alf4 in sample buffer (160 kDa, Complex from Escherichia coli K-12)
- Potassium-transporting atpase kdpc subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase atp-binding subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase kdpf subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase potassium-binding subunit (Protein from Escherichia coli K-12)
CryoEM Structure of KdpFABC in E2Pi state with AlF4
Sweet ME, Larsen C, Zhang X, Schlame M, Pedersen BP, Stokes DL
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2105195118 Pubmed: 34272288 ]
- Potassium-transporting atpase kdpc subunit (Protein from Escherichia coli K-12)
- Kdpfabc in e2pi state with alf4 and k+ in sample buffer (160 kDa, Complex from Escherichia coli K-12)
- Potassium-transporting atpase atp-binding subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase kdpf subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase potassium-binding subunit (Protein from Escherichia coli K-12)
CryoEM Structure of KdpFABC in E2Pi state with VO4
Sweet ME, Larsen C, Zhang X, Schlame M, Pedersen BP, Stokes DL
PNAS (2021) 118 [ DOI: doi:10.1073/pnas.2105195118 Pubmed: 34272288 ]
- Potassium-transporting atpase kdpc subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase atp-binding subunit (Protein from Escherichia coli K-12)
- Kdpfabc in e2pi state with vo4 in sample buffer (160 kDa, Complex from Escherichia coli K-12)
- Potassium-transporting atpase kdpf subunit (Protein from Escherichia coli K-12)
- Potassium-transporting atpase potassium-binding subunit (Protein from Escherichia coli K-12)